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13_1_40cm_4_scaffold_2809

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2809_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3..890)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2809_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(887..2053)
DNA (1167bp) protein (389aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B575F8
AAA ATPase central domain protein
AAA ATPase central domain protein {ECO:0000313|EMBL:AHG91368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2809_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2059..2847)
DNA (789bp) protein (263aa)
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
13_1_40cm_4_scaffold_2809_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2837..3430)
DNA (594bp) protein (198aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B408_DESCC
rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA/rRNA methyltransferase SpoU
13_1_40cm_4_scaffold_2809_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3660..4469
DNA (810bp) protein (270aa)
phosphomethylpyrimidine kinase n=1 Tax=Meiothermus timidus RepID=UPI000377A00C
phosphomethylpyrimidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Phosphomethylpyrimidine kinase
13_1_40cm_4_scaffold_2809_6
unknown

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comp(4471..4893)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_4_scaffold_2809_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4948..5682
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7F
Uncharacterized protein {ECO:0000313|EMBL:ELZ35110.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
13_1_40cm_4_scaffold_2809_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5657..6481)
DNA (825bp) protein (275aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ0_GEMAT
13_1_40cm_4_scaffold_2809_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6510..7922)
DNA (1413bp) protein (471aa)
Putative Na+(H+)/nucleoside cotransporter n=1 Tax=mine drainage metagenome RepID=E6QL85_9ZZZZ
Na+ dependent nucleoside transporter; K03317 concentrative nucleoside transporter, CNT family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Na+ dependent nucleoside transporter
13_1_40cm_4_scaffold_2809_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7923..9131)
DNA (1209bp) protein (403aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
add; adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ1_GEMAT
13_1_40cm_4_scaffold_2809_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9158..12256)
DNA (3099bp) protein (1033aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16)
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ3_GEMAT
13_1_40cm_4_scaffold_2809_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12311..13039
DNA (729bp) protein (243aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
phoB; phosphate regulon transcriptional regulatory protein PhoB
13_1_40cm_4_scaffold_2809_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13036..14760
DNA (1725bp) protein (575aa)
phoR; phosphate regulon sensor protein PhoR; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curate
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
13_1_40cm_4_scaffold_2809_14
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14827..15135
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. 5_2_56FAA RepID=U3GH13_9RALS
glycoside hydrolase
Glycoside hydrolase {ECO:0000313|EMBL:AJW46846.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica
13_1_40cm_4_scaffold_2809_15
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15151..15951
DNA (801bp) protein (267aa)
Glycosyl transferase group 1 n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CWA1_PAESJ
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACS99962.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2)
13_1_40cm_4_scaffold_2809_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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16100..16531
DNA (432bp) protein (144aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein tyrosine phosphatase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGE2_ANASK
protein tyrosine phosphatase
13_1_40cm_4_scaffold_2809_17
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16739..18364
DNA (1626bp) protein (542aa)
PppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing n=2 Tax=Geobacter sulfurreducens RepID=D7AKU2_GEOSK
gppA-2; pppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing
PppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing {ECO:0000313|EMBL:AAR35932.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacte
13_1_40cm_4_scaffold_2809_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18367..20481
DNA (2115bp) protein (705aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLF3_SINAD
polyphosphate kinase 1
13_1_40cm_4_scaffold_2809_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20493..21008
DNA (516bp) protein (172aa)
putative phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative phosphohistidine phosphatase, SixA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7E2_ANADF
putative phosphohistidine phosphatase SixA
13_1_40cm_4_scaffold_2809_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21001..22074
DNA (1074bp) protein (358aa)
metal-binding protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000367A718
CHAD domain containing protein
CHAD domain containing protein {ECO:0000313|EMBL:AHG91533.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2809_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22146..23225
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037A3B35
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2809_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23245..23724
DNA (480bp) protein (160aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003779E30
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphate ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_2809_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24310..24777
DNA (468bp) protein (156aa)
Candidate ABC type phosphate transport system, permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y150_RAMTT
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphate ABC transporter permease
Displaying 23 items

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