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13_1_40cm_4_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_286_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
aminopeptidase (EC:3.4.13.9); K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=GWA2_Rokubacteria_73_35_curated
aminopeptidase (EC:3.4.13.9)
Metallopeptidase family M24 protein id=4827678 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSL12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_286_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

482..1789
DNA (1308bp) protein (436aa)
UbiD family decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
13_1_40cm_4_scaffold_286_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1802..2467
DNA (666bp) protein (222aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627784 bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_286_4
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2496..3326)
DNA (831bp) protein (277aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TK56_9CYAN
dienelactone hydrolase-like enzyme
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:AFY82763.1}; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscil
13_1_40cm_4_scaffold_286_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3438..3926
DNA (489bp) protein (163aa)
id=4885132 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14625322 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_286_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3933..4559)
DNA (627bp) protein (209aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4766447 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_286_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4655..7768)
DNA (3114bp) protein (1038aa)
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glr3436 protein id=3830908 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase
13_1_40cm_4_scaffold_286_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7822..8280
DNA (459bp) protein (153aa)
Thiol-disulfide isomerase and thioredoxins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiol-disulfide isomerase and thioredoxins id=3830905 bin=GWF2_Methylomirabilis_70_14 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-disulfide oxidoreductase
13_1_40cm_4_scaffold_286_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8282..8476)
DNA (195bp) protein (65aa)
alcohol dehydrogenase GroES domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alcohol dehydrogenase GroES domain protein id=3824564 bin=GWC2_Methylomirabilis_70_16 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alcohol dehydrogenase GroES domain-containing protein
13_1_40cm_4_scaffold_286_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8473..9462)
DNA (990bp) protein (330aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2] id=14627250 bin=bin7_NC10_sister species=Shinella zoogloeoides genus=Shinella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
NagC; transcriptional regulator/sugar kinase
13_1_40cm_4_scaffold_286_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9496..10239)
DNA (744bp) protein (248aa)
YdjC-like protein; K03478 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
YdjC-like protein id=3269465 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_286_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10247..10813)
DNA (567bp) protein (189aa)
Methylase id=3269468 bin=GWA2_Methylomirabilis_73_35 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase
13_1_40cm_4_scaffold_286_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10938..11246)
DNA (309bp) protein (103aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=3269471 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_286_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11259..11747)
DNA (489bp) protein (163aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3269477 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_286_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11744..14392)
DNA (2649bp) protein (883aa)
Putative helicase id=3914659 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
helicase Tax=GWC2_Rokubacteria_70_16_curated
helicase
13_1_40cm_4_scaffold_286_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14461..14997
DNA (537bp) protein (179aa)
YCII-related id=3914668 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
YciI-like protein; K09780 hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_286_17
unknown

Not on your lists

15219..15443
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_286_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15475..16641)
DNA (1167bp) protein (389aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3960244 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_286_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

16766..18145
DNA (1380bp) protein (460aa)
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Tryptophan synthase beta chain id=3960243 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxal-phosphate dependent TrpB-like enzyme
13_1_40cm_4_scaffold_286_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18153..19829
DNA (1677bp) protein (559aa)
Adenylate/guanylate cyclase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5Q2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETW92716.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
family 3 adenylate cyclase
13_1_40cm_4_scaffold_286_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19967..21040)
DNA (1074bp) protein (358aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWA2_Rokubacteria_73_35_curated
Uroporphyrinogen decarboxylase (URO-D) id=2312843 bin=GWA2_Methylomirabilis_73_35 species=Methanococcus aeolicus genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase
13_1_40cm_4_scaffold_286_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

21159..22412
DNA (1254bp) protein (418aa)
id=14627806 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_286_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

22457..23524
DNA (1068bp) protein (356aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Hydrolase, carbon-nitrogen family id=3229907 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
13_1_40cm_4_scaffold_286_24
unknown

Not on your lists

23717..23866
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_286_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23877..24794)
DNA (918bp) protein (306aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Glycosyl transferase, family 9 id=3960148 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_286_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24818..25576)
DNA (759bp) protein (253aa)
histidinol-phosphate phosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidinol-phosphate phosphatase, putative id=3960146 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidinol-phosphate phosphatase
13_1_40cm_4_scaffold_286_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25573..25908)
DNA (336bp) protein (112aa)
4-carboxymuconolactone decarboxylase (EC:4.1.1.44) Tax=GWA2_Rokubacteria_73_35_curated
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Predicted 4-carboxymuconolactone decarboxylase id=3960144 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_286_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

25921..27306
DNA (1386bp) protein (462aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=14626970 bin=bin7_NC10_sister species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
13_1_40cm_4_scaffold_286_29
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

27312..28136
DNA (825bp) protein (275aa)
Methyltransferase type 11 n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S429_GEOOG
type 11 methyltransferase
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_4_scaffold_286_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28137..28799)
DNA (663bp) protein (221aa)
Haloacid dehalogenase-like hydrolase domain-containing protein 3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Haloacid dehalogenase-like hydrolase domain-containing protein 3 id=14626969 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Haloacid dehalogenase-like hydrolase domain-containing protein 3
Displaying items 1-30 of 59 in total

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