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13_1_40cm_4_scaffold_2913

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2913_1
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(3..1124)
DNA (1122bp) protein (374aa)
phosphoenolpyruvate-protein phosphotransferase; K02768 PTS system, fructose-specific IIA component [EC:2.7.1.69]; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]; K11183 phosphocarrier protein FPr id=24511641 bin=RBG_19FT_COMBO_GAL15_69_19 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_40cm_4_scaffold_2913_2
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1219..1461)
DNA (243bp) protein (81aa)
Phosphotransferase system HPr (HPr) family protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q295_9FIRM
Phosphotransferase system, phosphocarrier protein HPr
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:EKP95109.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Ther
13_1_40cm_4_scaffold_2913_3
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1614..2231
DNA (618bp) protein (206aa)
Glycerol-3-phosphate responsive antiterminator, GlpP n=1 Tax=Paenibacillus lactis 154 RepID=G4H905_9BACL
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Pa
glycerol-3-phosphate responsive antiterminator, GlpP
13_1_40cm_4_scaffold_2913_4
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2228..2806
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00035EA74F
antiterminator
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Pa
13_1_40cm_4_scaffold_2913_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3037..3921
DNA (885bp) protein (295aa)
Glycerol uptake facilitator protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A4I6_9EURY
Glycerol uptake facilitator protein {ECO:0000313|EMBL:GAD52554.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1
MIP family channel protein
13_1_40cm_4_scaffold_2913_6
unknown

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3929..4216
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_2913_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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5222..5881
DNA (660bp) protein (220aa)
dihydroxyacetone kinase subunit L; K05879 dihydroxyacetone kinase, C-terminal domain [EC:2.7.1.-] Tax=RBG_16_Chloroflexi_63_12_curated
dihydroxyacetone kinase DhaL subunit (EC:2.7.1.121)
Dihydroxyacetone kinase DhaL subunit n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XI13_9CHRO
13_1_40cm_4_scaffold_2913_8
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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5887..7443
DNA (1557bp) protein (519aa)
glycerol kinase (EC:2.7.1.30) id=14632672 bin=bin9_gal15 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin9_gal15 organism_group=GAL15
glycerol kinase (EC:2.7.1.30) Tax=CG_Dehalo_02
glycerol kinase (EC:2.7.1.30)
13_1_40cm_4_scaffold_2913_9
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7499..9145
DNA (1647bp) protein (549aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase, anaerobic, A subunit {ECO:0000313|EMBL:AEF95298.1}; EC=1.1.5.3 {ECO:0000313|EMBL:AEF95298.1};; Flags: Precursor;; TaxID=868595 species="Bacteria; Firmicutes; Clostr
Glycerol-3-phosphate dehydrogenase, anaerobic, A subunit n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B4C1_DESCC
13_1_40cm_4_scaffold_2913_10
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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9142..10410
DNA (1269bp) protein (423aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IG64_9CHLR
13_1_40cm_4_scaffold_2913_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10407..11675
DNA (1269bp) protein (423aa)
glpC; sn-glycerol-3-phosphate dehydrogenase subunit C; K00113 glycerol-3-phosphate dehydrogenase subunit C [EC:1.1.5.3] Tax=RBG_16_Deltaproteobacteria_49_23_curated
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRE9_ROSCS
glpC; sn-glycerol-3-phosphate dehydrogenase subunit C
13_1_40cm_4_scaffold_2913_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

11662..12066
DNA (405bp) protein (135aa)
Dihydroxyacetone kinase, phosphotransfer subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9M7_SPHTD
dihydroxyacetone kinase, phosphotransfer subunit
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:ACZ40520.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteracea
13_1_40cm_4_scaffold_2913_13
Actinopolyspora mortivallis, Actinopolyspora, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12063..12539
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI0003797796
13_1_40cm_4_scaffold_2913_14
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12554..13477
DNA (924bp) protein (308aa)
MxcA n=1 Tax=Stigmatella aurantiaca RepID=Q9F642_STIAU
Aldo/keto reductase {ECO:0000313|EMBL:KFA90718.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystob
mxcA; MxcA protein
13_1_40cm_4_scaffold_2913_15
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13486..13659
DNA (174bp) protein (58aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J0F3_FRASU
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:ADP81582.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (st
13_1_40cm_4_scaffold_2913_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13795..13986
DNA (192bp) protein (64aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262829B
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AIJ24889.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" so
13_1_40cm_4_scaffold_2913_17
unknown

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14230..14556
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_4_scaffold_2913_18
unknown

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14600..15208
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_40cm_4_scaffold_2913_19
unknown

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15210..15779
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_4_scaffold_2913_20
unknown

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15780..16394
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_4_scaffold_2913_21
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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16412..18061
DNA (1650bp) protein (550aa)
DNA ligase I, ATP-dependent (dnl1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=GWC2_RIF_CHLX_73_18_curated
Probable DNA ligase id=2876705 bin=GWC2_Chloroflexi_73_18 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA ligase I
13_1_40cm_4_scaffold_2913_22
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18058..18774)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000371E276
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_4_scaffold_2913_23
unknown

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comp(19082..19231)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_2913_24
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

19483..19950
DNA (468bp) protein (156aa)
hypothetical protein id=14630086 bin=bin8_Chloro species=Burkholderia ambifaria genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
conserved hypothethical protein, DUF1470
13_1_40cm_4_scaffold_2913_trna_1
unknown

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19988..20074
DNA (87bp)
transferRNA
13_1_40cm_4_scaffold_2913_25
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

20108..20581
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X2A2_NITSE id=5224355 bin=16ft_combo_ws3_JS1 species=Nitratifractor salsuginis genus=Nitratifractor taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=CG_Elusi_03
hypothetical protein
13_1_40cm_4_scaffold_2913_26
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20581..21054
DNA (474bp) protein (158aa)
tRNA-adenosine deaminase (EC:3.5.4.-)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiale
tRNA-adenosine deaminase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKK9_THEM7
13_1_40cm_4_scaffold_2913_27
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(21059..21904)
DNA (846bp) protein (282aa)
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
hypothetical protein id=1241438 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Hypothetical protein
13_1_40cm_4_scaffold_2913_28
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(21897..22460)
DNA (564bp) protein (188aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9K2_CALAS
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Chloroflexi_60_13_curated
putative RNA polymerase ECF-type sigma factor
13_1_40cm_4_scaffold_2913_trna_2
unknown

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22541..22614
DNA (74bp)
transferRNA
Displaying 30 items

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