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13_1_40cm_4_scaffold_2944

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2944_trna_2
unknown

Not on your lists

comp(1..74)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_2944_1
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

182..2728
DNA (2547bp) protein (849aa)
Sensor protein (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QMD6_9ZZZZ
PAS domain-containing protein Tax=CG_Arma_01
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_2944_2
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2828..3382
DNA (555bp) protein (185aa)
Response regulator receiver protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EKM4_CORAD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADE54931.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomarg
13_1_40cm_4_scaffold_2944_trna_1
unknown

Not on your lists

comp(3384..3457)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_2944_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(3540..4145)
DNA (606bp) protein (202aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPQ9_9FIRM
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
13_1_40cm_4_scaffold_2944_4
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4145..4465)
DNA (321bp) protein (107aa)
Bifunctional protein HldE n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GTQ0_9GAMM
D-heptose-7-phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavic
13_1_40cm_4_scaffold_2944_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4612..4986)
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2944_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4980..5309)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Rare lipoprotein B
13_1_40cm_4_scaffold_2944_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5446..6141)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2944_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6138..9020)
DNA (2883bp) protein (961aa)
Surface antigen (D15) n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRH5_9BACT
WD40 domain protein beta Propeller Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40 domain protein beta Propeller
13_1_40cm_4_scaffold_2944_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9017..11074)
DNA (2058bp) protein (686aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI53_CHLTF
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cyclophilin type peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_2944_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11034..11435)
DNA (402bp) protein (134aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003127485
4-hydroxybenzoyl-CoA thioesterase
13_1_40cm_4_scaffold_2944_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11464..13836)
DNA (2373bp) protein (791aa)
Putative aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C6_GEMAT
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90561.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aldehyde Dehydrogenase
13_1_40cm_4_scaffold_2944_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13836..14837)
DNA (1002bp) protein (334aa)
Deoxyribose-phosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C7_GEMAT
deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:AHG90560.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2944_13
unknown

Not on your lists

comp(14872..15216)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_4_scaffold_2944_14
unknown

Not on your lists

15249..16118
DNA (870bp) protein (290aa)

This feature has no annotations

13_1_40cm_4_scaffold_2944_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16115..16837
DNA (723bp) protein (241aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Calcineurin-like phosphoesterase superfamily domain protein
Metallophosphoesterase id=3669133 bin=GWA2_Ignavibacteria_55_11 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_4_scaffold_2944_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16824..17618)
DNA (795bp) protein (265aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate racemase
Glutamate racemase id=3490282 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_4_scaffold_2944_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17611..18150)
DNA (540bp) protein (180aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2944_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18099..18992)
DNA (894bp) protein (298aa)
Diacylglycerol kinase catalytic region n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAG1_CHLAD
diacylglycerol kinase catalytic subunit; K07029 Tax=GWC2_Gemmatimonadetes_71_10_curated
diacylglycerol kinase catalytic subunit
13_1_40cm_4_scaffold_2944_19
unknown

Not on your lists

comp(19053..19400)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_2944_20
unknown

Not on your lists

comp(19466..19831)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_2944_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19904..20248)
DNA (345bp) protein (115aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_2944_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20423..20803)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Desulfovibrio sp. X2 RepID=S7TT78_9DELT
endoribonuclease l-psp; K07567 TdcF protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
endoribonuclease l-psp
Displaying 24 items

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