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13_1_40cm_4_scaffold_3050

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3050_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..2517)
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FXZ8_9GAMM
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG90382.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3050_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2514..4265)
DNA (1752bp) protein (584aa)
putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X1_GEMAT
cell wall hydrolase/autolysin
13_1_40cm_4_scaffold_3050_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4431..5399
DNA (969bp) protein (323aa)
FHA domain containing protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIC2_ANASK
FHA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FHA domain-containing protein
13_1_40cm_4_scaffold_3050_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5396..6688
DNA (1293bp) protein (431aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA94_GEMAT
13_1_40cm_4_scaffold_3050_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6944..7981
DNA (1038bp) protein (346aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X0_GEMAT
protein phosphatase 2C domain protein
13_1_40cm_4_scaffold_3050_6
unknown

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comp(7975..8625)
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_40cm_4_scaffold_3050_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9110..9364
DNA (255bp) protein (85aa)
FHA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_3050_8
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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9634..11616
DNA (1983bp) protein (661aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ACL23605.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae;
13_1_40cm_4_scaffold_3050_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11636..11878)
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_3050_10

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comp(11909..12775)
DNA (867bp) protein (289aa)
xylose isomerase n=1 Tax=Rudanella lutea RepID=UPI00036190EC
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
xylose isomerase
13_1_40cm_4_scaffold_3050_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(12839..13855)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UW8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86547.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_4_scaffold_3050_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13928..16132)
DNA (2205bp) protein (735aa)
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG92755.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=8267367 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_40cm_4_scaffold_3050_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16135..16407)
DNA (273bp) protein (91aa)
competence-specific genes regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
Regulator of competence-specific genes id=1880626 bin=GWD2_Nitrospirae-related_57_8 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
competence-specific genes regulator
13_1_40cm_4_scaffold_3050_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16599..17360
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88914.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3050_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17375..18544
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88913.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3050_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18551..19252)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD43_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92694.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3050_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19293..19670)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCB1_9GAMM
YCII-related protein
YCII-related protein {ECO:0000313|EMBL:AHG88617.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3050_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19708..20607)
DNA (900bp) protein (300aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|RuleBase:RU000485};; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
6-phosphogluconate dehydrogenase n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00030893B8
13_1_40cm_4_scaffold_3050_19
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20686..21189
DNA (504bp) protein (168aa)
gluconate kinase (EC:2.7.1.12)
Gluconate kinase, SKI family {ECO:0000313|EMBL:ABE45433.1}; EC=2.7.1.12 {ECO:0000313|EMBL:ABE45433.1};; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
Gluconate kinase, SKI family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126V9_POLSJ
13_1_40cm_4_scaffold_3050_20
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21186..22643
DNA (1458bp) protein (486aa)
Transporter, gluconate:H+ symporter family n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X7V6_ANEAE
Transporter, gluconate:H+ symporter family {ECO:0000313|EMBL:ERI10623.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;"
Gluconate transporter family protein
13_1_40cm_4_scaffold_3050_21

Not on your lists

22603..23181
DNA (579bp) protein (193aa)
Putative metal-dependent hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFG6_CHLTF
Marine sediment metagenome DNA, contig: S01H1_C00387 {ECO:0000313|EMBL:GAF76563.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative metal-dependent hydrolase
13_1_40cm_4_scaffold_3050_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23253..23741)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00036AD6EC
transcription activator effector binding protein
Transcription activator effector binding protein {ECO:0000313|EMBL:AHG92928.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3050_23
unknown

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comp(23738..24262)
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_4_scaffold_3050_24
unknown

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comp(24290..24736)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_3050_25
unknown

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24867..25091
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_3050_26
unknown

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comp(25235..25339)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 26 items

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