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13_1_40cm_4_scaffold_3099

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3099_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1..108)
DNA (108bp) protein (36aa)
30S ribosomal protein S12 n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AGW2_SEBTE
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWC2_Gemmatimonadetes_71_10_curated
30S ribosomal protein S12
13_1_40cm_4_scaffold_3099_2
unknown

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comp(476..913)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_3
unknown

Not on your lists

comp(1633..2256)
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2632..6732)
DNA (4101bp) protein (1367aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00037DB326
YD repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Teneurin-3
13_1_40cm_4_scaffold_3099_5
unknown

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comp(7452..8036)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7993..13611)
DNA (5619bp) protein (1873aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD40_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40417.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_3099_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13734..14687)
DNA (954bp) protein (318aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI74_ANADF
sigma-54 dependent trancsriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS28420.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobac
13_1_40cm_4_scaffold_3099_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14684..16195)
DNA (1512bp) protein (504aa)
Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7C5_GEMAT
gspD; putative general secretion pathway protein D precursor
Putative general secretion pathway protein D {ECO:0000313|EMBL:BAH38135.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_1_40cm_4_scaffold_3099_9
unknown

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comp(16186..16671)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_10
unknown

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comp(16668..17264)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_11
unknown

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comp(17386..17916)
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_12
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18483..19367)
DNA (885bp) protein (295aa)
hypothetical protein
General secretion pathway protein K id=2213233 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
General secretion pathway protein K; K02460 general secretion pathway protein K Tax=GWB2_Deltaproteobacteria_55_19_curated
13_1_40cm_4_scaffold_3099_13
unknown

Not on your lists

comp(19364..19864)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_14
unknown

Not on your lists

comp(19861..20217)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_15
unknown

Not on your lists

comp(20204..20467)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_3099_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20516..20869)
DNA (354bp) protein (118aa)
General secretory pathway component, cryptic id=3979146 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
gspF; general secretory pathway component, cryptic Tax=GWC2_Rokubacteria_70_16_curated
type II secretion system F domain-containing protein
13_1_40cm_4_scaffold_3099_17
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(20812..21483)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037634D2
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
gspF; general secretion pathway protein F
13_1_40cm_4_scaffold_3099_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21622..22065)
DNA (444bp) protein (148aa)
Putative general secretion pathway protein G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E0_GEMAT
general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:AHG93842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3099_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(22049..22642)
DNA (594bp) protein (198aa)
General secretion pathway protein E (Type II traffic warden ATPase) Tax=GWC2_Rokubacteria_70_16_curated
Type II secretion system protein E (GspE) id=3979145 bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
general secretion pathway protein GspE
13_1_40cm_4_scaffold_3099_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(22654..23523)
DNA (870bp) protein (290aa)
General secretion pathway protein E (Type II traffic warden ATPase) id=14627801 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
General secretion pathway protein E (Type II traffic warden ATPase) Tax=CSP1_6_Rokubacteria
General secretion pathway protein E (Type II traffic warden ATPase)
13_1_40cm_4_scaffold_3099_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23777..24739)
DNA (963bp) protein (321aa)
Fis family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630A4B
Sphingomonas taxi strain 30a NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28106.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
two-component system response regulator
13_1_40cm_4_scaffold_3099_22
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25023..25412)
DNA (390bp) protein (130aa)
PilT protein domain protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B3Y7_FRADG
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:AEH09999.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
13_1_40cm_4_scaffold_3099_23
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(25409..25639)
DNA (231bp) protein (77aa)
Prevent-host-death family protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TGL1_9BURK
Prevent-host-death family protein {ECO:0000313|EMBL:KIC70943.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlam
antitoxin of toxin-antitoxin system, phd type
13_1_40cm_4_scaffold_3099_24
unknown

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comp(25686..25940)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying 24 items

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