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13_1_40cm_4_scaffold_3114

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3114_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..1827
DNA (1827bp) protein (609aa)
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG92755.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Serine/threonine protein kinase id=1250165 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_4_scaffold_3114_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1895..2167
DNA (273bp) protein (91aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Serine/threonine protein kinase with TPR repeats id=4746728 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
protein kinase
13_1_40cm_4_scaffold_3114_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2332..2856
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU5_GEMAT
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG88227.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3114_4
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3116..3910
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C5H2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS71978.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
hypothetical protein
13_1_40cm_4_scaffold_3114_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3969..4481)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035FC05B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF664
13_1_40cm_4_scaffold_3114_6
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(4503..5111)
DNA (609bp) protein (203aa)
msrA; peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QEN7_9CYAN
13_1_40cm_4_scaffold_3114_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5180..6727
DNA (1548bp) protein (516aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=1254432 species="B
Probable DNA ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6Z4_SORCE
13_1_40cm_4_scaffold_3114_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

6785..7303
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SGK2_PLABD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_4_scaffold_3114_9
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7319..7813)
DNA (495bp) protein (165aa)
Sortase-like acyltransferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKG5_TERRK
sortase
Sortase-like acyltransferase {ECO:0000313|EMBL:AFL89733.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18
13_1_40cm_4_scaffold_3114_10
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8952..9461
DNA (510bp) protein (170aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Streptomyces sp. PAMC26508 RepID=M9TTM2_9ACTO
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:AEN11666.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain
13_1_40cm_4_scaffold_3114_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9458..9964
DNA (507bp) protein (169aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T8_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH37948.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
13_1_40cm_4_scaffold_3114_12
unknown

Not on your lists

10036..10230
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_3114_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10322..10834
DNA (513bp) protein (171aa)
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor id=3395044 bin=GWF2_Lentisphaerae_49_21 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
13_1_40cm_4_scaffold_3114_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10834..11187
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_3114_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11184..11633
DNA (450bp) protein (150aa)
Heavy-metal resistance protein
Heavy-metal resistance protein {ECO:0000313|EMBL:AHG88946.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=3395047 bin=GWF2_Lentisphaerae_49_21 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
13_1_40cm_4_scaffold_3114_16
unknown

Not on your lists

comp(11640..12623)
DNA (984bp) protein (328aa)

This feature has no annotations

13_1_40cm_4_scaffold_3114_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12642..12998)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FN38_SORC5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
hypothetical protein
13_1_40cm_4_scaffold_3114_18
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13239..14996
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DE9D9
Uncharacterized protein {ECO:0000313|EMBL:ETW25219.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
putative carbamoyltransferase
13_1_40cm_4_scaffold_3114_19
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14980..15378)
DNA (399bp) protein (133aa)
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=CG_Desulfovib_01
4''''-phosphopantetheinyl transferase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035EAAAB
holo-acyl-carrier-protein synthase
13_1_40cm_4_scaffold_3114_20
unknown

Not on your lists

comp(15550..16032)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_4_scaffold_3114_21
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16147..16857
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6EA42
Uncharacterized protein {ECO:0000313|EMBL:KFN43835.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
hypothetical protein
13_1_40cm_4_scaffold_3114_22
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

Not on your lists

comp(16875..17525)
DNA (651bp) protein (217aa)
hypothetical protein Tax=RBG_13_WOR_3_43_14_curated
13_1_40cm_4_scaffold_3114_23
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17931..18758
DNA (828bp) protein (276aa)
haloacid dehalogenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017455B4
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_4_scaffold_3114_24
unknown

Not on your lists

comp(18877..19203)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_4_scaffold_3114_25
unknown

Not on your lists

19367..19636
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_3114_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19769..21328
DNA (1560bp) protein (520aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_3114_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21725..22696
DNA (972bp) protein (324aa)
Di-haem cytochrome c peroxidase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UQL6_9AQUI
di-heme cytochrome c peroxidase-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Di-heme cytochrome c peroxidase
13_1_40cm_4_scaffold_3114_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22712..23686)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEF8_9BRAD
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGF80582.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
molybdopterin-binding domain of aldehyde dehydrogenase family protein
Displaying 28 items

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