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13_1_40cm_4_scaffold_3209

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3209_1
Xenorhabdus poinarii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..454
-----------------
DNA (453bp)
protein (151aa)
argH; Argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=1 Tax=Klebsiella oxytoca M5al RepID=K6KQT3_KLEOX
13_1_40cm_4_scaffold_3209_2
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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441..923
-----------------
DNA (483bp)
protein (161aa)
Arginine repressor n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=ARGR_DESAP
arginine repressor ArgR
Arginine repressor {ECO:0000255|HAMAP-Rule:MF_00173}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator
13_1_40cm_4_scaffold_3209_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

979..2274
-----------------
DNA (1296bp)
protein (432aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
argininosuccinate synthase (EC:6.3.4.5)
Putative arginosuccinate synthase n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9W0_9ZZZZ
13_1_40cm_4_scaffold_3209_4
unknown

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comp(2155..2988)
-----------------
DNA (834bp)
protein (278aa)

This feature has no annotations

13_1_40cm_4_scaffold_3209_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3014..3586)
-----------------
DNA (573bp)
protein (191aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVW3_9CHLR
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFH84346.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;
two-component system response regulator
13_1_40cm_4_scaffold_3209_6
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3616..4740)
-----------------
DNA (1125bp)
protein (375aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA70_CONWI
Histidine kinase {ECO:0000313|EMBL:KJY23727.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
integral membrane sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_3209_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(4753..5484)
-----------------
DNA (732bp)
protein (244aa)
Putative ABC transporter ATP-binding protein id=4424656 bin=GWC2_Chloroflexi_73_18 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
antimicrobial peptide ABC transporter ATPase
13_1_40cm_4_scaffold_3209_8
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

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comp(5496..6689)
-----------------
DNA (1194bp)
protein (398aa)
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_13_OP11_40_15_curated
Putative ABC transporter permease protein id=4424655 bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter permease
13_1_40cm_4_scaffold_3209_9
unknown

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6861..7025
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_3209_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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7099..7983
-----------------
DNA (885bp)
protein (295aa)
Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUB8_RUBXD
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABG05010.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_1_40cm_4_scaffold_3209_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(7988..9142)
-----------------
DNA (1155bp)
protein (385aa)
Isocitrate lyase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYF1_THERP
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:ACM04880.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502
13_1_40cm_4_scaffold_3209_12
unknown

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comp(9151..9273)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

13_1_40cm_4_scaffold_3209_13
unknown

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comp(9344..9538)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_3209_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9623..10045)
-----------------
DNA (423bp)
protein (141aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
UPI0003D02B2F related cluster n=1 Tax=unknown RepID=UPI0003D02B2F
phosphoglycerate mutase protein
13_1_40cm_4_scaffold_3209_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10211..10795)
-----------------
DNA (585bp)
protein (195aa)
Transcriptional regulatory protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q099Y7_STIAD
Transcriptional regulatory protein {ECO:0000313|EMBL:EAU68516.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;"
MarR family transcriptional regulator
13_1_40cm_4_scaffold_3209_16
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists

comp(11095..11631)
-----------------
DNA (537bp)
protein (179aa)
phage shock protein PspC Tax=CG_CPR03_02
stress-responsive transcriptional regulator id=7201883 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
phage shock protein PspC
13_1_40cm_4_scaffold_3209_17
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11650..11805)
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PM58_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33632.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
13_1_40cm_4_scaffold_3209_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(11956..13188)
-----------------
DNA (1233bp)
protein (411aa)
Amidohydrolase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1Z5_VERMA
amidohydrolase Tax=RBG_16_Chloroflexi_68_14_curated
amidohydrolase
13_1_40cm_4_scaffold_3209_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13205..13987)
-----------------
DNA (783bp)
protein (261aa)
Zinc/iron permease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLY6_PSEUX
zinc/iron permease
Zinc/iron permease {ECO:0000313|EMBL:AEA22334.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
13_1_40cm_4_scaffold_3209_20
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

14141..14875
-----------------
DNA (735bp)
protein (245aa)
Iron dependent repressor (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AB37_9ZZZZ
DtxR family iron (metal) dependent repressor
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_4_scaffold_3209_21
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14934..15431)
-----------------
DNA (498bp)
protein (166aa)
Ammonium transporter n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJT8_9CHLR
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source=
AmtB; ammonia permease
13_1_40cm_4_scaffold_3209_22
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15550..16029
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V170_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84882.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
13_1_40cm_4_scaffold_3209_23
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16272..16649)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXC6_METHD
hypothetical protein Tax=RBG_16_Elusimicrobia_66_12_curated
hypothetical protein
13_1_40cm_4_scaffold_3209_24
unknown

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16712..17362
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

13_1_40cm_4_scaffold_3209_25
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17359..18021)
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000374B854
putative hydrolase Tax=RBG_16_RIF_CHLX_70_13_curated
beta-lactamase
13_1_40cm_4_scaffold_3209_26
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18040..19218)
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJI8_9CHLR
hypothetical protein Tax=RBG_16_Chloroflexi_51_9_curated
hypothetical protein
Displaying 26 items

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