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13_1_40cm_4_scaffold_3274

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3274_1
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..247
DNA (246bp) protein (82aa)
Copper-transporting ATPase CopA {ECO:0000313|EMBL:CEG54771.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CEG54771.1};; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomo
Heavy metal translocating P-type ATPase n=1 Tax=Oceanibaculum indicum P24 RepID=K2ID92_9PROT
heavy metal translocating P-type ATPase
13_1_40cm_4_scaffold_3274_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

342..740
DNA (399bp) protein (133aa)
copper resistance protein CopC; K14166 copper transport protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_3274_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

800..1015
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_3274_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1005..1856
DNA (852bp) protein (284aa)
cytochrome c biogenesis protein transmembrane region Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cytochrome c biogenesis protein transmembrane region id=2499493 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cytochrome c biogenesis protein transmembrane region
13_1_40cm_4_scaffold_3274_5
unknown

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1882..2001
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_6
unknown

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2020..2193
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

2204..2440
DNA (237bp) protein (79aa)
putative thiol-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Thioredoxin family protein id=4646438 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiol-disulfide oxidoreductase
13_1_40cm_4_scaffold_3274_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

2519..2740
DNA (222bp) protein (74aa)
Redoxin domain protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Redoxin domain protein id=4646441 bin=GWA2_Methylomirabilis_73_35 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3274_9
unknown

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comp(3605..4168)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_10
unknown

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comp(4439..4600)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_11
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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comp(4642..5028)
DNA (387bp) protein (129aa)
nitrogen regulatory protein p-ii Tax=RBG_16_Caldithrix_48_16_curated
Nitrogen regulatory protein p-ii id=4384348 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
nitrogen regulatory protein P-II
13_1_40cm_4_scaffold_3274_12
unknown

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comp(4985..5308)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5361..6461)
DNA (1101bp) protein (367aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 11 id=1884749 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SAM-dependent methlyltransferase
13_1_40cm_4_scaffold_3274_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6461..7957)
DNA (1497bp) protein (499aa)
multicopper oxidase type 3 id=14626019 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
multicopper oxidase type 3 Tax=CSP1_6_Rokubacteria
multicopper oxidase, type 3
13_1_40cm_4_scaffold_3274_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7954..8658)
DNA (705bp) protein (235aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V565_9BRAD
Cytochrome c class I {ECO:0000313|EMBL:EFI53095.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cytochrome C
13_1_40cm_4_scaffold_3274_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8664..9374)
DNA (711bp) protein (237aa)
SCO1 protein homolog id=3870917 bin=GWA2_Methylomirabilis_73_35 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SCO1 protein; K07152 Tax=GWA2_Rokubacteria_73_35_curated
SCO1 protein
13_1_40cm_4_scaffold_3274_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9385..9708)
DNA (324bp) protein (108aa)
cytochrome c biogenesis protein id=14626016 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cytochrome c biogenesis protein Tax=CSP1_6_Rokubacteria
cytochrome c biogenesis protein
13_1_40cm_4_scaffold_3274_18

Not on your lists

comp(10236..10583)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PRS0_9FIRM
Marine sediment metagenome DNA, contig: S01H1_C01166 {ECO:0000313|EMBL:GAF85733.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_3274_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11212..11433)
DNA (222bp) protein (74aa)
Thiol:disulfide interchange protein TlpA Tax=GWA2_Rokubacteria_73_35_curated
Thiol:disulfide interchange protein TlpA id=3870916 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum amazonense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
13_1_40cm_4_scaffold_3274_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11536..11766)
DNA (231bp) protein (77aa)
hypothetical protein id=3870915 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
putative thiol-disulfide oxidoreductase
13_1_40cm_4_scaffold_3274_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11748..12008)
DNA (261bp) protein (87aa)
hypothetical protein id=14626018 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_3274_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12021..12620)
DNA (600bp) protein (200aa)
hypothetical protein id=14626017 bin=bin7_NC10_sister species=Loktanella cinnabarina genus=Loktanella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_3274_23
unknown

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comp(12640..13110)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13146..13517)
DNA (372bp) protein (124aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_1_40cm_4_scaffold_3274_25
unknown

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comp(13698..13940)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_26
unknown

Not on your lists

14511..15062
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_4_scaffold_3274_27
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

15135..18311
DNA (3177bp) protein (1059aa)
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA id=12556444 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cation transporter
13_1_40cm_4_scaffold_3274_28
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

18341..18748
DNA (408bp) protein (136aa)
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
13_1_40cm_4_scaffold_3274_29
unknown

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18772..18873
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 29 items

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