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13_1_40cm_4_scaffold_335

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_335_1
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2..787
DNA (786bp) protein (262aa)
Putative reductase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM59_IGNAJ
reductase
Putative reductase {ECO:0000313|EMBL:AFH50066.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium alb
13_1_40cm_4_scaffold_335_2
unknown

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854..1081
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_335_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(1124..1819)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG08_NITGG
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_335_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2155..2628)
DNA (474bp) protein (158aa)
Ribonuclease HI n=1 Tax=halophilic archaeon J07HX5 RepID=U1MFL7_9EURY
Ribonuclease HI {ECO:0000313|EMBL:ERG87924.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
ribonuclease H
13_1_40cm_4_scaffold_335_5
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2656..4248)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WPV0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51422.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
13_1_40cm_4_scaffold_335_6
unknown

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comp(4249..5130)
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_40cm_4_scaffold_335_7

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comp(5156..6010)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDH1_ARCPA
Marine sediment metagenome DNA, contig: S03H2_L06909 {ECO:0000313|EMBL:GAH35488.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_4_scaffold_335_8
Thermoplasmatales archaeon A-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(6307..7113)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N732_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB71126.1}; TaxID=667135 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon A-pl
13_1_40cm_4_scaffold_335_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7448..7960
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000367F08C
Uncharacterized protein {ECO:0000313|EMBL:KFA92879.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
phosphatidylglycerophosphate synthase
13_1_40cm_4_scaffold_335_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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8000..9001
DNA (1002bp) protein (334aa)
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] id=14425044 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=CSP1_2_Dadabacteria
glycine cleavage system t protein (EC:2.1.2.10)
13_1_40cm_4_scaffold_335_11
unknown

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comp(8998..9696)
DNA (699bp) protein (233aa)

This feature has no annotations

13_1_40cm_4_scaffold_335_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(9741..10127)
DNA (387bp) protein (129aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_335_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(10165..10890)
DNA (726bp) protein (242aa)
16S rRNA methyltransferase n=1 Tax=Thermococcus zilligii RepID=UPI000299E84C
ribosome biogenesis protein; K14568 essential for mitotic growth 1 Tax=RBG_13_Bathyarchaeota_38_9_curated
ribosome biogenesis protein
13_1_40cm_4_scaffold_335_14
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10951..11256
DNA (306bp) protein (102aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
UPI0003D1A2D4 related cluster n=1 Tax=unknown RepID=UPI0003D1A2D4
ribonuclease P protein component 4
13_1_40cm_4_scaffold_335_15
RBG_16_Archaea_50_20_curated, Archaea

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11794..12138
DNA (345bp) protein (115aa)
DNA-binding protein UNCMA_18240 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Y1824_UNCMA
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_335_16
RBG_16_Archaea_50_20_curated, Archaea

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12300..12755
DNA (456bp) protein (152aa)
50S ribosomal protein L31e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IJ55_NITGG
ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=RBG_16_Archaea_50_20_curated
rpl31e; 50S ribosomal protein L31e
13_1_40cm_4_scaffold_335_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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12759..13424
DNA (666bp) protein (222aa)
Putative translation initiation factor eIF-6 n=1 Tax=uncultured Acidilobus sp. MG RepID=V4LV87_9CREN
translation initiation factor 6 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor IF-6
13_1_40cm_4_scaffold_335_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13680..14150
DNA (471bp) protein (157aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
GIM5; prefoldin subunit alpha
13_1_40cm_4_scaffold_335_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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14143..15048
DNA (906bp) protein (302aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJU3_THEBM
FtsY-like signal recognition particle receptor protein subunit alpha; K03110 fused signal recognition particle receptor Tax=RBG_13_Bathyarchaeota_38_9_curated
FtsY-like signal recognition particle receptor protein subunit alpha
13_1_40cm_4_scaffold_335_20
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(15109..15378)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4I4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47203.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_4_scaffold_335_21
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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15755..16444
DNA (690bp) protein (230aa)
Ornithine carbamoyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D509_PELTS
ArgF; ornithine carbamoyltransferase
Tax=BJP_IG2158_Thermincola_46_17
13_1_40cm_4_scaffold_335_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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16574..16777
DNA (204bp) protein (68aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_335_23
RBG_16_Archaea_50_20_curated, Archaea

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16869..17288
DNA (420bp) protein (140aa)
Transcription elongation factor Spt5 n=2 Tax=Pyrococcus furiosus RepID=SPT5_PYRFU
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Archaea_50_20_curated
nusG; transcription antitermination protein NusG
13_1_40cm_4_scaffold_335_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17413..17757
DNA (345bp) protein (115aa)
50S ribosomal protein L11 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALD2_METOI
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L11
13_1_40cm_4_scaffold_335_25
RBG_16_Archaea_50_20_curated, Archaea

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17770..18432
DNA (663bp) protein (221aa)
50S ribosomal protein L1 n=1 Tax=Methanobacterium sp. MB1 RepID=U6EC15_9EURY
50S ribosomal protein L1 Tax=RBG_16_Archaea_50_20_curated
rpl1p; 50S ribosomal protein L1P
13_1_40cm_4_scaffold_335_26
RBG_16_Archaea_50_20_curated, Archaea

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18437..19312
DNA (876bp) protein (292aa)
50S ribosomal protein L10 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEN6_PYRF1
rpl10p; acidic ribosomal protein P0 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L10
13_1_40cm_4_scaffold_335_27
RBG_16_Archaea_50_20_curated, Archaea

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19373..19675
DNA (303bp) protein (101aa)
50S ribosomal protein L12 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MP7_NANEQ
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=RBG_16_Archaea_50_20_curated
rpl12p; 50S ribosomal protein L12P
13_1_40cm_4_scaffold_335_28
RBG_16_Archaea_50_20_curated, Archaea

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19991..22591
DNA (2601bp) protein (867aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Archaea_50_20_curated
Alanine--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKE3_THELI
alanyl-tRNA synthetase
13_1_40cm_4_scaffold_335_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22776..25496
DNA (2721bp) protein (907aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1237085 species="Archaea; Thaumar
Leucine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH1_NITGG
13_1_40cm_4_scaffold_335_30
unknown

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comp(25503..25724)
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 30 items

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