ggKbase home page

13_1_40cm_4_scaffold_3365

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3365_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1040)
DNA (1038bp) protein (346aa)
Trigger factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB45_GEMAT
tig; trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Trigger factor
13_1_40cm_4_scaffold_3365_2
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1210..1731)
DNA (522bp) protein (174aa)
hypothetical protein Tax=RBG_16_Zixibacteria_40_9_curated
hypothetical protein id=1249810 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Predicted membrane protein
13_1_40cm_4_scaffold_3365_3
GWB1_OP11_41_15, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1981..2616
DNA (636bp) protein (212aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR93238.1}; TaxID=1618428 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_15.;"
transmembrane_regions 4..21 id=725386 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
13_1_40cm_4_scaffold_3365_4
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(2691..4778)
DNA (2088bp) protein (696aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QKT2_9CYAN
tolB; peptidase S9 prolyl oligopeptidase active site domain protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AGY58224.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloe
13_1_40cm_4_scaffold_3365_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4782..6227)
DNA (1446bp) protein (482aa)
Amidohydrolase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMQ6_9FIRM
peptidase dimerization domain protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:AHG88923.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3365_6
unknown

Not on your lists

6420..6794
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_7
unknown

Not on your lists

comp(7120..7449)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_8
unknown

Not on your lists

8290..9297
DNA (1008bp) protein (336aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_9
unknown

Not on your lists

9294..9935
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_10
unknown

Not on your lists

9979..10425
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10422..10805
DNA (384bp) protein (128aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_3365_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10815..11264
DNA (450bp) protein (150aa)
Two-component system response regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VYH0_9ACTO
rre-1; response regulator receiver
Two-component system response regulator {ECO:0000313|EMBL:AGZ41827.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friu
13_1_40cm_4_scaffold_3365_13
unknown

Not on your lists

comp(11261..11611)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_14
Marinobacter similis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11729..12397)
DNA (669bp) protein (223aa)
transcriptional regulator n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037A92F8
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AHI28718.1}; TaxID=1420916 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source=
Crp/Fnr family transcriptional regulator
13_1_40cm_4_scaffold_3365_15
unknown

Not on your lists

12680..12967
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_16
unknown

Not on your lists

13005..13307
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13324..13698)
DNA (375bp) protein (125aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_3365_trna_1
unknown

Not on your lists

comp(13759..13840)
DNA (82bp)
transferRNA
13_1_40cm_4_scaffold_3365_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13897..14238)
DNA (342bp) protein (114aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_3365_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14318..14767)
DNA (450bp) protein (150aa)
Rhodanese-related sulfurtransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2Z5_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF84821.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
rhodanese-related sulfurtransferase
13_1_40cm_4_scaffold_3365_20
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15020..15937)
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025Z5_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AKF85208.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
LysR family transcriptional regulator
13_1_40cm_4_scaffold_3365_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16002..17966
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379DB1A
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein {ECO:0000313|EMBL:AHG88769.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3365_22
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18023..18175
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003608163
two component transcriptional regulator
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_40cm_4_scaffold_3365_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18162..19031)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I852_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93668.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3365_24
unknown

Not on your lists

19093..19767
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_4_scaffold_3365_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19845..23018
DNA (3174bp) protein (1058aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADR0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89180.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 26 items

View Taxonomy