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13_1_40cm_4_scaffold_3404

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3404_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1085)
DNA (1083bp) protein (361aa)
Transposase, IS4 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNY4_9PROT
transposase, IS4 Tax=GWC2_Gemmatimonadetes_71_10_curated
transposase, IS4
13_1_40cm_4_scaffold_3404_2
unknown

Not on your lists

1725..1907
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_3404_3
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2311..2757
DNA (447bp) protein (149aa)
PEP motif putative anchor domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJJ3_NITSI
PEP motif anchor domain-containing protein
PEP motif putative anchor domain protein {ECO:0000313|EMBL:AEJ02797.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source=
13_1_40cm_4_scaffold_3404_4
unknown

Not on your lists

comp(2644..3204)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_4_scaffold_3404_5
unknown

Not on your lists

3576..3875
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_3404_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3899..4669
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=2811602 bin=GWC2_Methylomirabilis_70_24 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
M48 family peptidase
13_1_40cm_4_scaffold_3404_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4876..5526
DNA (651bp) protein (217aa)
Uncharacterized protein id=2455317 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
toluene tolerance Ttg2 superfamily protein
13_1_40cm_4_scaffold_3404_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5631..7958
DNA (2328bp) protein (776aa)
Protein export membrane protein, SecD/SecF family Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=2455316 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Protein export membrane protein, SecD/SecF family
13_1_40cm_4_scaffold_3404_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7940..8311
DNA (372bp) protein (124aa)
Uncharacterized protein id=2455316 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Protein export membrane protein, SecD/SecF family Tax=GWA2_Rokubacteria_70_23_curated
Protein export membrane protein, SecD/SecF family
13_1_40cm_4_scaffold_3404_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8371..9378
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU79_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39571.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_3404_11
unknown

Not on your lists

9530..9751
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_3404_12
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

9904..11076
DNA (1173bp) protein (391aa)
Ribonuclease BN {ECO:0000313|EMBL:AHJ26871.1}; EC=3.1.-.- {ECO:0000313|EMBL:AHJ26871.1};; TaxID=313624 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumige
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344AC2F
ribonuclease BN
13_1_40cm_4_scaffold_3404_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11316..11624
DNA (309bp) protein (103aa)
id=2811810 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=2811810 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_3404_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11677..12180
DNA (504bp) protein (168aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TraR/DksA family id=2811598 bin=GWC2_Methylomirabilis_70_24 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TraR/DksA family transcriptional regulator
13_1_40cm_4_scaffold_3404_15
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12436..12972
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036FF722
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI61622.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
13_1_40cm_4_scaffold_3404_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(13411..13698)
DNA (288bp) protein (96aa)
hypothetical protein id=14430015 bin=bin3_NC10 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_4_scaffold_3404_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13921..14265)
DNA (345bp) protein (115aa)
id=3877521 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3877521 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_3404_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14424..14816)
DNA (393bp) protein (131aa)
Response regulatory protein id=4224084 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Response regulator receiver protein {ECO:0000313|EMBL:BAK65751.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
response regulator receiver protein
13_1_40cm_4_scaffold_3404_19
unknown

Not on your lists

14943..15044
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_4_scaffold_3404_20
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15406..15777
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEE3_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82950.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_3404_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15774..16133
DNA (360bp) protein (120aa)
Putative circadian clock protein, KaiC n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEE4_ANADE
circadian clock protein, KaiC; K08482 circadian clock protein KaiC Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
circadian clock protein, KaiC
13_1_40cm_4_scaffold_3404_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16189..17232
DNA (1044bp) protein (348aa)
Putative circadian clock protein, KaiC n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEE4_ANADE
circadian clock protein, KaiC; K08482 circadian clock protein KaiC Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
circadian clock protein, KaiC
13_1_40cm_4_scaffold_3404_23
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17602..18879
DNA (1278bp) protein (426aa)
Sensor protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNL8_STIAD
luxQ5; sensor histidine kinase/response regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
sensor protein
13_1_40cm_4_scaffold_3404_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18908..20488
DNA (1581bp) protein (527aa)
nodV; nodulation protein V Tax=GWA2_Rokubacteria_70_23_curated
Multi-sensor signal transduction histidine kinase id=4374373 bin=GWC2_Methylomirabilis_70_24 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PAS/PAC sensor signal transduction histidine kinase
Displaying 24 items

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