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13_1_40cm_4_scaffold_3898

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3898_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3..365
DNA (363bp) protein (121aa)
N-acetyl-ornithine/N-acetyl-lysine deacetylase n=2 Tax=Chloroflexus RepID=A9WJY2_CHLAA
N-acetyl-ornithine/N-acetyl-lysine deacetylase; K05831 LysW-gamma-L-lysine carboxypeptidase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acetyl-lysine deacetylase
13_1_40cm_4_scaffold_3898_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

395..2374
DNA (1980bp) protein (660aa)
bse:Bsel_0658 adenylate/guanylate cyclase with CHASE sensor; K01768 adenylate cyclase [EC:4.6.1.1] id=1242875 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative transmembrane sensor domain protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
adenylate/guanylate cyclase with Chase sensor
13_1_40cm_4_scaffold_3898_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2377..2871
DNA (495bp) protein (165aa)
GAF domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N2B5_CORCM
GAF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GAF domain-containing protein
13_1_40cm_4_scaffold_3898_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2871..4121
DNA (1251bp) protein (417aa)
Metal dependent phosphohydrolase n=1 Tax=bacterium S5 RepID=D3C0T7_9BACT id=20412 bin=ACD20 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
metal-dependent phosphohydrolase HD sub domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cyclic di-GMP phosphodiesterase response regulator RpfG
13_1_40cm_4_scaffold_3898_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4118..4960
DNA (843bp) protein (281aa)
Beta-lactamase domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LL06_HALO1
beta-lactamase superfamily hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
beta-lactamase
13_1_40cm_4_scaffold_3898_6
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5021..5353
DNA (333bp) protein (111aa)
Uncharacterized protein id=4916055 bin=GWC2_Methylomirabilis_70_16 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Uncharacterized protein {ECO:0000313|EMBL:GAB90690.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
13_1_40cm_4_scaffold_3898_7
unknown

Not on your lists

comp(5286..5990)
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_40cm_4_scaffold_3898_trna_1
unknown

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6043..6127
DNA (85bp)
transferRNA
13_1_40cm_4_scaffold_3898_8
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6162..7082)
DNA (921bp) protein (307aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNY0_ROSCS
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ABU59275.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Rose
13_1_40cm_4_scaffold_3898_9
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(7173..8072)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037AA8E0
NAD-binding 6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase NAD-binding {ECO:0000313|EMBL:ABY36531.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;"
13_1_40cm_4_scaffold_3898_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8072..8425)
DNA (354bp) protein (118aa)
id=3810781 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
id=3810781 Tax=GWC2_RIF_CHLX_73_18_curated
13_1_40cm_4_scaffold_3898_11
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8507..9868
DNA (1362bp) protein (454aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=264732 spe
Trigger factor n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=TIG_MOOTA
trigger factor
13_1_40cm_4_scaffold_3898_12
unknown

Not on your lists

comp(9910..10896)
DNA (987bp) protein (329aa)

This feature has no annotations

13_1_40cm_4_scaffold_3898_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10925..11905)
DNA (981bp) protein (327aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Carboxymethylenebutenolidase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWK9_HERA2
carboxymethylenebutenolidase
13_1_40cm_4_scaffold_3898_14
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11972..13117)
DNA (1146bp) protein (382aa)
Response regulator receiver protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3C9_ANATU
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:BAJ62943.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermo
13_1_40cm_4_scaffold_3898_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13117..13482)
DNA (366bp) protein (122aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Polaromonas sp. CF318 RepID=J2LFZ9_9BURK
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EJL84058.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
histidine kinase
13_1_40cm_4_scaffold_3898_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(13479..15479)
DNA (2001bp) protein (667aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMK2_9CHLR
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_3898_17
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

15644..16306
DNA (663bp) protein (221aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease, proteolytic subunit ClpP id=14628677 bin=bin8_Chloro species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent Clp protease, proteolytic subunit ClpP Tax=CSP1_4_Chloroflexi
13_1_40cm_4_scaffold_3898_18
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

16310..17584
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=14628678 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=CSP1_4_Chloroflexi
ATP-dependent Clp protease ATP-binding subunit ClpX
13_1_40cm_4_scaffold_3898_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

17592..17954
DNA (363bp) protein (121aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3K3_THERP
cupin 2, conserved barrel domain protein
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ACM06449.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium r
13_1_40cm_4_scaffold_3898_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18113..21676
DNA (3564bp) protein (1188aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7L1_SPHTD
diguanylate cyclase and metal dependent phosphohydrolase
Diguanylate cyclase and metal dependent phosphohydrolase {ECO:0000313|EMBL:ACZ37844.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaeroba
13_1_40cm_4_scaffold_3898_21
unknown

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21737..22057
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_4_scaffold_3898_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


22260..24941
DNA (2682bp) protein (894aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZP2_THERP
13_1_40cm_4_scaffold_3898_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(25012..26307)
DNA (1296bp) protein (432aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein id=24411898 bin=RBG_19FT_COMBO_GAL15_69_19 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ugpB; glycerol-3-phosphate-binding periplasmic protein
13_1_40cm_4_scaffold_3898_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(26437..27768)
DNA (1332bp) protein (444aa)
ABC transporter, substrate-binding protein n=1 Tax=uncultured bacterium A1Q1_fos_2004 RepID=L7VTD3_9BACT
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
family 1 extracellular solute-binding protein
13_1_40cm_4_scaffold_3898_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(27800..28681)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002EA793D
carbohydrate ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_3898_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(28674..29654)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036B0F78
carbohydrate ABC transporter membrane protein 1, cut1 family; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
permease component of ABC-type sugar transporter
13_1_40cm_4_scaffold_3898_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

29705..30010
DNA (306bp) protein (102aa)
FmdB family transcriptional regulator n=1 Tax=Ruania albidiflava RepID=UPI0003B6864B
FmdB family regulatory protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
FmdB family regulatory protein
13_1_40cm_4_scaffold_3898_28
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30043..30813
DNA (771bp) protein (257aa)
Ribonuclease BN n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B1E9_NATA1
Ribonuclease BN {ECO:0000313|EMBL:ELZ04053.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 / DSM
ribonuclease BN
13_1_40cm_4_scaffold_3898_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

30800..31555
DNA (756bp) protein (252aa)
FHA domain containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU68_ROSS1
forkhead-associated protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
FHA domain-containing protein
Displaying items 1-30 of 39 in total

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