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13_1_40cm_4_scaffold_3866

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3866_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

639..1421
DNA (783bp) protein (261aa)
PDZ/DHR/GLGF domain-containing protein; K08372 putative serine protease PepD [EC:3.4.21.-]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003623659
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
13_1_40cm_4_scaffold_3866_2
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1497..3419)
DNA (1923bp) protein (641aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB {ECO:0000313|EMBL:ABQ91390.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABQ91390.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chlo
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
13_1_40cm_4_scaffold_3866_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3416..4090)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFL2_SORC5
TENA/THI-4 family
Uncharacterized protein {ECO:0000313|EMBL:CAN95003.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_4_scaffold_3866_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4291..4830
DNA (540bp) protein (180aa)
Putative transcriptional regulator n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDB7_9SPHN
PadR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional regulator PadR family protein
13_1_40cm_4_scaffold_3866_5
unknown

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comp(4866..5612)
DNA (747bp) protein (249aa)

This feature has no annotations

13_1_40cm_4_scaffold_3866_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5615..6208)
DNA (594bp) protein (198aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APY2_AZOBR
clpP; ATP-dependent Clp protease proteolytic subunit
13_1_40cm_4_scaffold_3866_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6247..6846)
DNA (600bp) protein (200aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_40cm_4_scaffold_3866_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(6843..7211)
DNA (369bp) protein (123aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=14627887 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=CSP1_6_Rokubacteria
molybdopterin dehydrogenase FAD-binding protein
13_1_40cm_4_scaffold_3866_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7211..9670)
DNA (2460bp) protein (820aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs id=1247861 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_4_scaffold_3866_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9657..10178)
DNA (522bp) protein (174aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein id=14627889 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_40cm_4_scaffold_3866_11
unknown

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10290..10943
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_40cm_4_scaffold_3866_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11020..12273
DNA (1254bp) protein (418aa)
Membrane dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
putative dipeptidase (EC:3.4.13.-)
Putative dipeptidase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YR30_9CAUL
13_1_40cm_4_scaffold_3866_13
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12286..13722)
DNA (1437bp) protein (479aa)
Glycosyl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP36_BLASD
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:CCG02697.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain D
13_1_40cm_4_scaffold_3866_14
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(13719..14780)
DNA (1062bp) protein (354aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH69_THET1
PBS lyase HEAT domain-containing protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ACZ43090.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC B
13_1_40cm_4_scaffold_3866_15
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14777..15685)
DNA (909bp) protein (303aa)
Transcriptional regulatory, C terminal family protein n=3 Tax=Burkholderia thailandensis RepID=N0APD4_BURTH
transcriptional regulatory, C terminal family protein
Uncharacterized protein {ECO:0000313|EMBL:AJY38589.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
13_1_40cm_4_scaffold_3866_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15746..15970
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QEH3_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU70864.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
13_1_40cm_4_scaffold_3866_17
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

16064..16990
DNA (927bp) protein (309aa)
metal dependent phosphohydrolase Tax=RBG_16_Zixibacteria_43_9_curated
metal dependent phosphohydrolase id=24519186 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_3866_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16987..17265)
DNA (279bp) protein (93aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_3866_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17394..18779
DNA (1386bp) protein (462aa)
peptidase M16-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase M16-like protein id=3800449 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
peptidase M16-like protein
13_1_40cm_4_scaffold_3866_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18776..20218
DNA (1443bp) protein (481aa)
Putative M16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9T2_GEMAT
peptidase M16 domain protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AHG88464.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3866_21
unknown

Not on your lists

comp(20236..20730)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_4_scaffold_3866_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(20848..21843)
DNA (996bp) protein (332aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H679_ANADF
3-oxoacyl-(acyl-carrier-protein) synthase III
13_1_40cm_4_scaffold_3866_23
unknown

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21914..22171
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_3866_24
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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22208..24244
DNA (2037bp) protein (679aa)
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=GWA2_Ignavibacteria_54_16_curated
dipeptidyl aminopeptidase/acylaminoacyl-peptidase id=24432021 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9, prolyl oligopeptidase active site region
13_1_40cm_4_scaffold_3866_25
unknown

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24244..24624
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_4_scaffold_3866_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24662..24937)
DNA (276bp) protein (92aa)
Zn-dependent aminopeptidase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZU29_9BACT
peptidase
Peptidase {ECO:0000313|EMBL:AHG89716.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 26 items

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