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13_1_40cm_4_scaffold_4072

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4072_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

525..1319
DNA (795bp) protein (265aa)
rocC; amino acid permease rocC Tax=RBG_16_Gemmatimonadetes_66_8_curated
amino acid permease id=24444110 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
amino acid permease
13_1_40cm_4_scaffold_4072_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1272..2093)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B78EDF
hypothetical protein; K09729 hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_4072_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2142..3680
DNA (1539bp) protein (513aa)
Putative FAD linked oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J2_GEMAT
putative FAD linked oxidase; K06911 Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD linked oxidase domain protein
13_1_40cm_4_scaffold_4072_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3647..4438
DNA (792bp) protein (264aa)
thyX; thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=GWC2_Gemmatimonadetes_71_10_curated
thyX; thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J0_GEMAT
13_1_40cm_4_scaffold_4072_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4502..5572
DNA (1071bp) protein (357aa)
D-alanine-D-alanine ligase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein id=3454609 bin=GWC2_Deltaproteobacteria_42_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
D-alanine-D-alanine ligase-like protein
13_1_40cm_4_scaffold_4072_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5569..6633
DNA (1065bp) protein (355aa)
D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein id=2423735 bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ATP-grasp enzyme, D-alanine-D-alanine ligase
13_1_40cm_4_scaffold_4072_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7131..8066
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003821674
kamA; Lysine 2,3-aminomutase Tax=RBG_16_Gemmatimonadetes_66_8_curated
kamA; Lysine 2,3-aminomutase
13_1_40cm_4_scaffold_4072_8
unknown

Not on your lists

comp(8206..8466)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_4072_9
unknown

Not on your lists

comp(8712..8891)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_4_scaffold_4072_10
unknown

Not on your lists

comp(9411..9629)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_4072_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9927..10262)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:EWC63630.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongi
13_1_40cm_4_scaffold_4072_12
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10338..11267)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016AE080
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
hypothetical protein
13_1_40cm_4_scaffold_4072_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11316..11888)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLR0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35206.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" sourc
13_1_40cm_4_scaffold_4072_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12375..12584
DNA (210bp) protein (70aa)
gltB; glutamate synthase [NADPH] large subunit (EC:1.4.1.13)
Class II glutamine amidotransferase {ECO:0000313|EMBL:KDD57794.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell
13_1_40cm_4_scaffold_4072_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12692..13570
DNA (879bp) protein (293aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA8_KORVE
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABF40942.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
13_1_40cm_4_scaffold_4072_16
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13590..14612
DNA (1023bp) protein (341aa)
peptidylarginine deiminase-like protein (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=RBG_16_Deltaproteobacteria_58_17_curated
Agmatine deiminase id=3982000 bin=GWC2_Syntrophobacterales_56_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
aguA; agmatine deiminase
13_1_40cm_4_scaffold_4072_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(14624..15601)
DNA (978bp) protein (326aa)
hypothetical protein id=14632678 bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_40cm_4_scaffold_4072_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15763..17859)
DNA (2097bp) protein (699aa)
Putative elongation factor G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I9_GEMAT
putative elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
small GTP-binding protein
13_1_40cm_4_scaffold_4072_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18046..18684)
DNA (639bp) protein (213aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_4072_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18736..19902)
DNA (1167bp) protein (389aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULD6_ANASK
major facilitator transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_4072_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19965..22145)
DNA (2181bp) protein (727aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021M6_SOLUE
doubled CXXCH domain protein
Doubled CXXCH domain protein {ECO:0000313|EMBL:AHG91875.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4072_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22142..22669)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000376366B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91874.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4072_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

22965..24446
DNA (1482bp) protein (494aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C639_SPHTD
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACZ37577.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae;
13_1_40cm_4_scaffold_4072_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24497..25381)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038011BC
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG91799.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 24 items

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