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13_1_40cm_4_scaffold_4153

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4153_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..1051
DNA (1050bp) protein (350aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_1_40cm_4_scaffold_4153_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

1041..1955
DNA (915bp) protein (305aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_1_40cm_4_scaffold_4153_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2019..2960
DNA (942bp) protein (314aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HemY2 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3I1_SORC5
hemY2; hypothetical protein
13_1_40cm_4_scaffold_4153_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3024..5030)
DNA (2007bp) protein (669aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transketolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
transketolase
13_1_40cm_4_scaffold_4153_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5027..5347)
DNA (321bp) protein (107aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_4153_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5428..5874
DNA (447bp) protein (149aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gemmatimonadetes_66_8_curated
lepB; signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] id=24657258 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
signal peptidase I
13_1_40cm_4_scaffold_4153_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5952..6104
DNA (153bp) protein (51aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgon
Signal peptidase I n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW50_9PORP
signal peptidase I
13_1_40cm_4_scaffold_4153_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6107..8251
DNA (2145bp) protein (715aa)
TonB-dependent receptor n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GU57_THISH
Uncharacterized protein {ECO:0000313|EMBL:ETX00812.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
TonB-dependent receptor
13_1_40cm_4_scaffold_4153_9
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8280..10016
DNA (1737bp) protein (579aa)
exaA; quinoprotein ethanol dehydrogenase ExaA (EC:1.1.2.8) Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
exaA; quinoprotein ethanol dehydrogenase ExaA (EC:1.1.2.8)
Quino(Hemo)protein alcohol dehydrogenase, PQQ-dependent n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUD7_9BURK
13_1_40cm_4_scaffold_4153_10
unknown

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comp(10066..10668)
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_40cm_4_scaffold_4153_11
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10842..11474
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WRX6_ALIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV59387.1}; Flags: Precursor;; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobaci
13_1_40cm_4_scaffold_4153_12

Not on your lists

11682..12863
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY96666.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
outer membrane channel
13_1_40cm_4_scaffold_4153_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12993..13208)
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=2 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
infA; translation initiation factor IF-1
13_1_40cm_4_scaffold_4153_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13249..13518)
DNA (270bp) protein (90aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_4153_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13635..13898
DNA (264bp) protein (88aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_4153_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14302..15579
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_4153_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15591..16679
DNA (1089bp) protein (363aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_4153_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16676..18085
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T8_GEMAT
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4153_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18099..19751)
DNA (1653bp) protein (551aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_40cm_4_scaffold_4153_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19751..20884)
DNA (1134bp) protein (378aa)
Putative branched-chain amino acid-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N5_GEMAT
putative branched-chain amino acid-binding protein
Putative branched-chain amino acid-binding protein {ECO:0000313|EMBL:BAH37545.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmati
13_1_40cm_4_scaffold_4153_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20959..21855
DNA (897bp) protein (299aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_4153_22
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

comp(21852..22769)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ16 RepID=UPI0003828CBA
hypothetical protein; K06889 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
Dienelactone hydrolase family protein
13_1_40cm_4_scaffold_4153_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

22882..24483
DNA (1602bp) protein (534aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL9_GEMAT
protein kinase
13_1_40cm_4_scaffold_4153_24
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24555..25430
DNA (876bp) protein (292aa)
Thiamine-phosphate pyrophosphorylase protein {ECO:0000313|EMBL:ERJ05693.1}; EC=2.5.1.3 {ECO:0000313|EMBL:ERJ05693.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
ADP-ribosyl-(dinitrogen reductase) hydrolase (EC:3.2.2.24)
Thiamine-phosphate pyrophosphorylase protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DZZ8_9EURY
13_1_40cm_4_scaffold_4153_25
unknown

Not on your lists

comp(25434..25928)
DNA (495bp) protein (165aa)

This feature has no annotations

Displaying 25 items

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