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13_1_40cm_4_scaffold_427

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_427_1
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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65..406
DNA (342bp) protein (114aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
13_1_40cm_4_scaffold_427_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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524..1582
DNA (1059bp) protein (353aa)
SpoVT/AbrB domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YH75_METS5
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
SpoVT/AbrB domain-containing protein
13_1_40cm_4_scaffold_427_3
R_OP11_Woesebacteria_44_14, Woesebacteria, Microgenomates, Bacteria

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2848..3777
DNA (930bp) protein (310aa)
algD; GDP-mannose 6-dehydrogenase (algD) (EC:1.1.1.132); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_14_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CM59_9BACT
13_1_40cm_4_scaffold_427_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3740..5068
DNA (1329bp) protein (443aa)
Glycosyl transferase family 2 n=1 Tax=Frankia sp. CN3 RepID=G6HI99_9ACTO
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGL19011.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
13_1_40cm_4_scaffold_427_5
unknown

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comp(4991..6391)
DNA (1401bp) protein (467aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_6

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comp(6417..7586)
DNA (1170bp) protein (390aa)
seg 423..433 id=130259 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE20750.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_427_7
RBG_16_Archaea_50_20_curated, Archaea

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9474..9803
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_427_8
unknown

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comp(10076..10525)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_9
unknown

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10797..11195
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_10
RBG_16_Archaea_50_20_curated, Archaea

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11192..11488
DNA (297bp) protein (99aa)
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_427_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11485..12324
DNA (840bp) protein (280aa)
Putative RecA-superfamily ATPases implicated in signal transduction n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8T9_METCZ
RecA-superfamily ATPase possibly involved in signal transduction
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:AIF84415.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
13_1_40cm_4_scaffold_427_12
unknown

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12338..12685
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_13
unknown

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comp(12851..13378)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_14
unknown

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comp(13440..13571)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(13857..15170)
DNA (1314bp) protein (438aa)
tryptophan synthase subunit beta; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_13_Bathyarchaeota_46_16b_curated
pyridoxal-phosphate dependent TrpB-like protein; K06001 tryptophan synthase beta chain [EC:4.2.1.20] id=24474796 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tryptophan synthase subunit beta (EC:4.2.1.20)
13_1_40cm_4_scaffold_427_16
unknown

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comp(15314..15586)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_17
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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15657..16904
DNA (1248bp) protein (416aa)
UPF0272 protein Kcr_0480 n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L454_KORCO
hypothetical protein
UPF0272 protein Kcr_0480 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
13_1_40cm_4_scaffold_427_18
unknown

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16923..17705
DNA (783bp) protein (261aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_19
unknown

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comp(17734..18084)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_20
unknown

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18333..18680
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_21
unknown

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18833..19402
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_22
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

19541..20047
DNA (507bp) protein (169aa)
Glutathione S-transferase transmembrane protein n=2 Tax=Methanosarcina mazei RepID=M1QG36_METMZ
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
Glutathione S-transferase transmembrane protein
13_1_40cm_4_scaffold_427_23
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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20037..20402
DNA (366bp) protein (122aa)
Transcriptional regulator, ArsR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYN0_9CHLR
ArsR family regulatory protein Tax=RBG_16_Chloroflexi_52_11_curated
ArsR family regulatory protein
13_1_40cm_4_scaffold_427_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20665..22332
DNA (1668bp) protein (556aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_427_25
unknown

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22666..22857
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_26
unknown

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23154..23309
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_4_scaffold_427_27
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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23306..23653
DNA (348bp) protein (116aa)
Pirin domain protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z270_DESAF
Pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:EGJ51279.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio
13_1_40cm_4_scaffold_427_28
unknown

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comp(23841..24101)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 28 items

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