name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_428_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
188..976
|
enoyl-CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Enoyl-CoA hydratase/isomerase id=4534449 bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase
|
|
13_1_40cm_4_scaffold_428_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
988..1584
|
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase, group 1 id=4681940 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
|
|
13_1_40cm_4_scaffold_428_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
1572..2000
|
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=4534448 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
|
|
13_1_40cm_4_scaffold_428_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
2734..3138
|
pts; 6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase id=4534446 bin=GWF2_Methylomirabilis_70_14 species=Gracilibacillus halophilus genus=Gracilibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_428_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
3135..3716
|
folE; GTP cyclohydrolase I (EC:3.5.4.16) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
folE; GTP cyclohydrolase I (EC:3.5.4.16) id=14626369 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
GTP cyclohydrolase (EC:3.5.4.16)
|
|
13_1_40cm_4_scaffold_428_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
3713..4384
|
short chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GTP cyclohydrolase I id=4681943 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
|
|
13_1_40cm_4_scaffold_428_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
4425..4751
|
Iron-binding protein IscA (Iron-sulfur cluster assembly protein) id=4681944 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein)
|
|
13_1_40cm_4_scaffold_428_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
4772..5443
|
moaDE; molybdopterin converting factor, subunits 1/2; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=14626372 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
MoaD family protein
|
|
13_1_40cm_4_scaffold_428_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
5409..6818
|
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tRNA(Ile)-lysidine synthase id=4681946 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA(Ile)-lysidine synthetase
|
|
13_1_40cm_4_scaffold_428_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
6887..8266
|
degQ; protease degQ (EC:3.4.21.-); K04772 serine protease DegQ [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Protease Do id=4681947 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
degQ; periplasmic trypsin-like serine protease lipoprotein DegQ
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13_1_40cm_4_scaffold_428_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
8263..9213
|
two component sigma54 specific Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Response regulator id=4232767 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sigma-54 dependent transcriptional regulator
|
|
13_1_40cm_4_scaffold_428_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
9165..9695
|
two component sigma54 specific Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AtoC; response regulator; K07714 two-component system, NtrC family, response regulator AtoC id=14626375 bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Fis family transcriptional regulator
|
|
13_1_40cm_4_scaffold_428_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
9692..11257
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Exported protein id=3824666 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_428_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(11324..12475)
|
LysM domain-containing protein 2; K08086 pilus assembly protein FimV Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
WGS project CABT00000000 data, contig 2.14 id=3824668 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
|
|
13_1_40cm_4_scaffold_428_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(12579..13748)
|
LysM domain-containing protein 2; K08086 pilus assembly protein FimV Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
WGS project CABT00000000 data, contig 2.14 id=3824668 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PEP-CTERM motif protein
|
|
13_1_40cm_4_scaffold_428_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(13977..14606)
|
pmtA; phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pmtA; phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Similar to phosphatidylethanolamine N-methyltransferase id=4866643 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_428_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(14721..16067)
|
Mg/Co/Ni transporter; K06213 magnesium transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
magnesium transporter; K06213 magnesium transporter id=14626380 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Mg/Co/Ni transporter
|
|
13_1_40cm_4_scaffold_428_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(16064..17431)
|
Phosphoesterase, RecJ domain protein id=4139262 bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoesterase domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
|
|
13_1_40cm_4_scaffold_428_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(17478..18926)
|
aspartate ammonia-lyase (EC:4.2.1.2); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Fumarate hydratase class II id=4866639 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_428_20
unknown
|
Not on your lists |
comp(18942..19178)
|
This feature has no annotations |
|
13_1_40cm_4_scaffold_428_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(19334..21574)
|
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) id=4183572 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_428_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(21603..22802)
|
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1)
Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (APGAM) id=3020272 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_428_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(22893..23795)
|
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=3020269 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
|
|
13_1_40cm_4_scaffold_428_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
23956..24345
|
Putative uncharacterized protein id=3020266 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
13_1_40cm_4_scaffold_428_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
24563..24697
|
id=3742536 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
13_1_40cm_4_scaffold_428_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(24701..25081)
|
id=3020265 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3020265 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_428_27
R_NC10_66_22, NC10, Bacteria
|
Not on your lists |
25126..25581
|
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037888C4
hypothetical protein; K06934 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
|
|
13_1_40cm_4_scaffold_428_28
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25651..26985
|
Extracellular solute-binding protein family 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAW9_ANADF
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABS25865.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae;
|
|
13_1_40cm_4_scaffold_428_29
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26982..27968
|
ABC transporter permease n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003683B0D
ABC transporter permease
ABC transport system permease protein y4oQ {ECO:0000313|EMBL:AEI75620.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source=
|
|
13_1_40cm_4_scaffold_428_30
CSP1_5_NC10, NC10, Bacteria
|
Not on your lists |
27977..28834
|
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein id=14430377 bin=bin3_NC10 species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=CSP1_5_NC10
Binding-protein-dependent transport systems inner membrane component
|