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13_1_40cm_4_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_42_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..296)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA1529 RepID=UPI0002E32636
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADP83930.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_40cm_4_scaffold_42_2
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(318..1163)
DNA (846bp) protein (282aa)
ABC-type transporter, permease subunit n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K051_SACES
ABC-type transporter, permease subunit
ABC-type transporter, permease subunit {ECO:0000313|EMBL:CCH30289.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix esp
13_1_40cm_4_scaffold_42_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1189..2091)
DNA (903bp) protein (301aa)
ABC transporter permease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W384_9ACTO
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AGZ42460.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 735
13_1_40cm_4_scaffold_42_4
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2088..3200)
DNA (1113bp) protein (371aa)
ABC transporter substrate-binding protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037B293D
putative ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAL90497.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinop
13_1_40cm_4_scaffold_42_5
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3358..4143)
DNA (786bp) protein (262aa)
IclR family transcriptional regulator n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00036A3F61
IclR family transcriptional regulator {ECO:0000313|EMBL:ELQ78511.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus
IclR family transcriptional regulator
13_1_40cm_4_scaffold_42_6
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4223..4945
DNA (723bp) protein (241aa)
corrinoid methyltransferase n=1 Tax=actinobacterium SCGC AAA023-J06 RepID=UPI00037910B3
Dimethylamine corrinoid protein {ECO:0000313|EMBL:CCI54991.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74
methyltransferase cognate corrinoid protein
13_1_40cm_4_scaffold_42_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

4953..5813
DNA (861bp) protein (287aa)
hypothetical protein; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=GWC2_RIF_CHLX_73_18_curated
Uncharacterized protein id=4954672 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_42_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5810..7636
DNA (1827bp) protein (609aa)
Uncharacterized protein id=4954671 bin=GWC2_Chloroflexi_73_18 species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
metal-binding protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
metal-binding protein
13_1_40cm_4_scaffold_42_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

7633..8217
DNA (585bp) protein (195aa)
Uncharacterized protein id=4954670 bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_1_40cm_4_scaffold_42_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

8225..8512
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00038114E1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_4_scaffold_42_11
unknown

Not on your lists

8509..8955
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_42_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8864..9385)
DNA (522bp) protein (174aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D0P3_9BACT
glutamate formiminotransferase
13_1_40cm_4_scaffold_42_13

Not on your lists

comp(9465..10913)
DNA (1449bp) protein (483aa)
Putative trimethylamine methyltransferase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WXJ2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGA15566.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
trimethylamine methyltransferase subfamily protein
13_1_40cm_4_scaffold_42_14
Trichoderma virens, Trichoderma, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

11062..13491
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Hypocrea virens (strain Gv29-8 / FGSC 10586) RepID=G9MSN2_HYPVG
Uncharacterized protein {ECO:0000313|EMBL:EHK22193.1}; TaxID=413071 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trich
protein kinase family protein
13_1_40cm_4_scaffold_42_15
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13516..13941
DNA (426bp) protein (142aa)
Histidine triad (HIT) protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7D6_CELFA
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AEE46897.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 48
13_1_40cm_4_scaffold_42_16
unknown

Not on your lists

comp(13947..14243)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_42_17
unknown

Not on your lists

14450..15916
DNA (1467bp) protein (489aa)

This feature has no annotations

13_1_40cm_4_scaffold_42_18
unknown

Not on your lists

comp(15810..16595)
DNA (786bp) protein (262aa)

This feature has no annotations

13_1_40cm_4_scaffold_42_19
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17077..17397
DNA (321bp) protein (107aa)
AMP-dependent synthetase and ligase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46QC9_CUPPJ
AMP-dependent synthetase/ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:AAZ64655.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriav
13_1_40cm_4_scaffold_42_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17407..18273)
DNA (867bp) protein (289aa)
Xylose isomerase-like TIM barrel n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV96_RUBXD
xylose isomerase-like protein
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:ABG04682.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; R
13_1_40cm_4_scaffold_42_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18381..19358
DNA (978bp) protein (326aa)
N-acetyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetyltransferase GCN5 id=14631198 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
GCN5-related N-acetyltransferase
13_1_40cm_4_scaffold_42_22
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19355..19792
DNA (438bp) protein (146aa)
Thioesterase superfamily protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCB3_GEOOG
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB76241.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus ob
13_1_40cm_4_scaffold_42_23
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19792..20304
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1F8_9PROT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EGY00647.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitro
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_42_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20246..21382)
DNA (1137bp) protein (379aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAD3_SPHTD
major facilitator superfamily protein Tax=RBG_16_RIF_CHLX_72_14_curated
major facilitator superfamily MFS_1
13_1_40cm_4_scaffold_42_25
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

21408..22178
DNA (771bp) protein (257aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3Z4_THERP
biotin/lipoate A/B protein ligase
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:ACM07046.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (
13_1_40cm_4_scaffold_42_26
unknown

Not on your lists

comp(22183..22689)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_4_scaffold_42_27
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

22710..24284
DNA (1575bp) protein (525aa)
Transmembrane efflux protein id=4709197 bin=GWC2_Chloroflexi_73_18 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
EmrB/QacA subfamily drug resistance transporter Tax=GWC2_RIF_CHLX_73_18_curated
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_4_scaffold_42_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(24288..25214)
DNA (927bp) protein (309aa)
Glycine betaine/choline-binding protein of an ABC-type transport system Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Substrate-binding region of ABC-type glycine betaine transport system id=4709202 bin=GWC2_Chloroflexi_73_18 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
quaternary ammonium transporter
13_1_40cm_4_scaffold_42_29
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25334..26041)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00037C277F
Binding-protein-dependent transporter system inner membrane protein {ECO:0000313|EMBL:KEZ78419.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaera
ABC transporter permease
13_1_40cm_4_scaffold_42_30
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(26038..26715)
DNA (678bp) protein (226aa)
osmoprotectant transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Binding-protein-dependent transport systems inner membrane component id=4709198 bin=GWC2_Chloroflexi_73_18 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
binding-protein-dependent transport systems inner membrane component
Displaying items 1-30 of 71 in total

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