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13_1_40cm_4_scaffold_4209

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4209_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3..710
DNA (708bp) protein (236aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PXP5_CATAD
putative drug transport protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_4_scaffold_4209_2
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(744..2168)
DNA (1425bp) protein (475aa)
Mg-chelatase subunit ChlI-like protein; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_16_Chloroflexi_51_9_curated
Magnesium chelatase subunit ChlI n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6I7_9CHLR
Mg-chelatase subunit ChlI-like protein
13_1_40cm_4_scaffold_4209_3
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2390..2965
DNA (576bp) protein (192aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RBG_16_Desulfobacca_60_12_curated
glycerophosphodiester phosphodiesterase id=14632911 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
glycerophosphodiester phosphodiesterase
13_1_40cm_4_scaffold_4209_4
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

3028..3534
DNA (507bp) protein (169aa)
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Chloroflexi_53_26_curated
RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor, ECF subfamily id=2777671 bin=GWC2_Chloroflexi_73_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_4209_5
unknown

Not on your lists

3531..4715
DNA (1185bp) protein (395aa)

This feature has no annotations

13_1_40cm_4_scaffold_4209_6
unknown

Not on your lists

4871..5572
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_40cm_4_scaffold_4209_7
unknown

Not on your lists

comp(5576..6031)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_4_scaffold_4209_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

6351..6815
DNA (465bp) protein (155aa)
transcription elongation factor GreA n=1 Tax=Kurthia sp. JC8E RepID=UPI0002894693
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
greA; transcription elongation factor GreA
13_1_40cm_4_scaffold_4209_9
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6802..7905
DNA (1104bp) protein (368aa)
Dipeptidase n=1 Tax=Exiguobacterium pavilionensis RW-2 RepID=U1M0Z8_9BACL
metallopeptidase
Metallopeptidase {ECO:0000313|EMBL:AIQ11803.1}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azotofixan
13_1_40cm_4_scaffold_4209_10
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

7905..8435
DNA (531bp) protein (177aa)
Transcriptional regulator, Fur family protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q4I7_9CLOT
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RBG_16_Chloroflexi_50_11_curated
ferric uptake regulator family protein
13_1_40cm_4_scaffold_4209_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8481..9176
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003773EF5
Uncharacterized protein {ECO:0000313|EMBL:EDY16837.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_40cm_4_scaffold_4209_12
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

9220..9543
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BJC3_MEISD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_4_scaffold_4209_13
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9551..10222
DNA (672bp) protein (224aa)
HAD family hydrolase n=3 Tax=Amycolatopsis mediterranei RepID=D8HVE6_AMYMU
HAD family hydrolase {ECO:0000313|EMBL:KDN18554.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
HAD family hydrolase
13_1_40cm_4_scaffold_4209_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10264..10953
DNA (690bp) protein (230aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ04_PSEUX
Crp/Fnr family transcriptional regulator Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Crp/Fnr family transcriptional regulator
13_1_40cm_4_scaffold_4209_15
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10946..11776)
DNA (831bp) protein (277aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=56780 species="Bacteria; Prote
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI0003808D16
13_1_40cm_4_scaffold_4209_16
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

12093..12857
DNA (765bp) protein (255aa)
Rhodanese domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBQ5_THET1
Rhodanese domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_4_scaffold_4209_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

12857..13300
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYK4_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98091.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_40cm_4_scaffold_4209_18
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

13297..13710
DNA (414bp) protein (138aa)
hypothetical protein id=14632848 bin=bin9_gal15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
13_1_40cm_4_scaffold_4209_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13721..14953
DNA (1233bp) protein (411aa)
Putative Leu/Ile/Val-binding protein homolog 8 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP88_AZOBR
putative Leu/Ile/Val-binding protein homolog 8
Putative Leu/Ile/Val-binding protein homolog 8 {ECO:0000313|EMBL:CCD01061.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;"
13_1_40cm_4_scaffold_4209_20
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14950..15459)
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TNY1_THETC
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL67719.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Therm
13_1_40cm_4_scaffold_4209_21

Not on your lists

comp(15467..15856)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000381EF70
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AFD03138.1}; TaxID=1131000 species="Bacteria; environmental samples.;" source="uncultured bacterium W5-77b.;"
hypothetical protein
13_1_40cm_4_scaffold_4209_22
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15876..17150
DNA (1275bp) protein (425aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=120965 species="Bacteria; Plan
Acetylornithine aminotransferase n=1 Tax=uncultured planctomycete RepID=H5SE94_9BACT
4-aminobutyrate aminotransferase
13_1_40cm_4_scaffold_4209_23
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(17147..18334)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZU6_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98533.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_40cm_4_scaffold_4209_24
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18400..19236
DNA (837bp) protein (279aa)
5''''-3'''' exonuclease n=1 Tax=Streptomyces sp. AA1529 RepID=UPI000366D951
5'-3' exonuclease {ECO:0000313|EMBL:EPD96345.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
5'-3' exonuclease
13_1_40cm_4_scaffold_4209_25
unknown

Not on your lists

comp(19511..20779)
DNA (1269bp) protein (423aa)

This feature has no annotations

13_1_40cm_4_scaffold_4209_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(20829..21608)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNN0_9ACTO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_4209_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21601..22170)
DNA (570bp) protein (190aa)
RNA polymerase sigma factor n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9Q6_STRRD
RNA polymerase sigma factor RpoE Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_4209_28
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

22246..22761
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI00037B3F18
putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_RIF_CHLX_72_14_curated
putative RNA polymerase ECF-subfamily sigma factor
13_1_40cm_4_scaffold_4209_29
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22742..23512
DNA (771bp) protein (257aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase n=2 Tax=Thermobifida fusca RepID=Q47PS6_THEFY
Uncharacterized protein {ECO:0000313|EMBL:ETX00904.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
methylated-DNA-(protein)-cysteine S-methyltransferase
13_1_40cm_4_scaffold_4209_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(23522..24085)
DNA (564bp) protein (188aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] id=14628007 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=CSP1_6_Rokubacteria
Displaying items 1-30 of 31 in total

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