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13_1_40cm_4_scaffold_4220

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4220_1
RBG_16_Archaea_50_20_curated, Archaea

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1..330
DNA (330bp) protein (110aa)
ribose 5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RBG_16_Archaea_50_20_curated
ribose 5-phosphate isomerase (EC:5.3.1.6)
Uncharacterized protein n=1 Tax=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) RepID=G0W6N5_NAUDC
13_1_40cm_4_scaffold_4220_2
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(515..1228)
DNA (714bp) protein (238aa)
SAM-dependent methyltransferase, ubiE/COQ5 family n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A2C6_THEGJ
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AHL22879.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.
13_1_40cm_4_scaffold_4220_3
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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1629..2723
DNA (1095bp) protein (365aa)
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_16_Bathyarchaeota_57_9_curated
Phosphoglycerate kinase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BEF6_METIK
phosphoglycerate kinase
13_1_40cm_4_scaffold_4220_trna_1
unknown

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2782..2864
DNA (83bp)
transferRNA
13_1_40cm_4_scaffold_4220_4
Thermoanaerobacter sp. X514, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2868..4322)
DNA (1455bp) protein (485aa)
Drug resistance transporter, EmrB/QacA subfamily n=5 Tax=Thermoanaerobacter RepID=B0K3D4_THEPX
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABY93245.1}; Flags: Precursor;; TaxID=399726 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterace
13_1_40cm_4_scaffold_4220_5
RBG_16_Archaea_50_20_curated, Archaea

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4790..5158
DNA (369bp) protein (123aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_4220_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5299..6618
DNA (1320bp) protein (440aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) Tax=RBG_13_Bathyarchaeota_46_16b_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY7_NITGG
13_1_40cm_4_scaffold_4220_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6676..6861
DNA (186bp) protein (62aa)
Preprotein translocase subunit SecG Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_4_scaffold_4220_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(6887..7837)
DNA (951bp) protein (317aa)
mRNA 3'-end processing factor n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Z8_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_4220_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(7887..8177)
DNA (291bp) protein (97aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_4220_10
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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8366..8689
DNA (324bp) protein (108aa)
DNA/RNA-binding protein Alba n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B4R5_ACIHW
DNA/RNA-binding protein AlbA; K03622 archaea-specific DNA-binding protein Tax=RBG_16_Bathyarchaeota_57_9_curated
DNA/RNA-binding protein Alba
13_1_40cm_4_scaffold_4220_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

8816..10102
DNA (1287bp) protein (429aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19) Tax=RBG_13_Bathyarchaeota_46_16b_curated
4-aminobutyrate aminotransferase (EC:2.6.1.17 2.6.1.11 2.6.1.13)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037E812F
13_1_40cm_4_scaffold_4220_12
unknown

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10503..11192
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_40cm_4_scaffold_4220_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(11774..11995)
DNA (222bp) protein (74aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_4220_14
unknown

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comp(11946..12185)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_4_scaffold_4220_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(12204..13340)
DNA (1137bp) protein (379aa)
Single-stranded DNA-binding replication protein A (RPA) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5L6_METCZ
replication factor A; K07466 replication factor A1 Tax=RBG_16_Archaea_50_20_curated
Single-stranded DNA-binding replication protein A (RPA)
13_1_40cm_4_scaffold_4220_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13348..16170)
DNA (2823bp) protein (941aa)
ATP-dependent DNA helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_16_Archaea_50_20_curated
ATP-dependent DNA helicase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSN3_METAC
ATP-dependent DNA helicase
13_1_40cm_4_scaffold_4220_17
unknown

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comp(16200..16349)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_4220_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

16794..17783
DNA (990bp) protein (330aa)
Putative phosphoesterase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ62_METPS
phosphoesterase; K06953 Tax=RBG_16_Bathyarchaeota_48_13_curated
putative phosphoesterase
13_1_40cm_4_scaffold_4220_19
unknown

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comp(17796..18188)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_4_scaffold_4220_20
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18651..19067
DNA (417bp) protein (139aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EI68_METSB
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACK50550.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" s
13_1_40cm_4_scaffold_4220_21
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19382..19828
DNA (447bp) protein (149aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
13_1_40cm_4_scaffold_4220_22
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19845..20321
DNA (477bp) protein (159aa)
Cupin n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R4H0_HALMT
cupin
Cupin {ECO:0000313|EMBL:AHZ21509.1}; Cupin 2 domain-containing protein {ECO:0000313|EMBL:AFK19130.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofer
13_1_40cm_4_scaffold_4220_23
unknown

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21597..22145
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_4_scaffold_4220_24
unknown

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comp(22544..23962)
DNA (1419bp) protein (473aa)

This feature has no annotations

13_1_40cm_4_scaffold_4220_25
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24073..24624)
DNA (552bp) protein (184aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
putative transposase IS605 OrfB family
Putative transposase IS605 OrfB family {ECO:0000313|EMBL:AIC15978.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
Displaying 26 items

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