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13_1_40cm_4_scaffold_4423

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4423_1
unknown

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1..399
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_4_scaffold_4423_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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396..989
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_4423_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1131..1826
DNA (696bp) protein (232aa)
DtxR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF6_GEMAT
DtxR family transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
DtxR family transcriptional regulator
13_1_40cm_4_scaffold_4423_4
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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1823..2653
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000382D4D7
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_40cm_4_scaffold_4423_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2653..4014
DNA (1362bp) protein (454aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
mntH; putative manganese transport protein MntH; K03322 manganese transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Manganese transport protein mntH
13_1_40cm_4_scaffold_4423_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4014..4442
DNA (429bp) protein (143aa)
Universal stress protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AHG91899.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4423_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4449..6263)
DNA (1815bp) protein (605aa)
Putative hydroxlacyl-CoA dehydrogenase n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U0W1_BORBO
hydroxlacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hydroxlacyl-CoA dehydrogenase
13_1_40cm_4_scaffold_4423_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6349..7734)
DNA (1386bp) protein (462aa)
resA; thiol-disulfide oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Thiol-disulfide oxidoreductase id=4274239 bin=GWC2_Nitrospirae_57_13 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
resA2; thiol-disulfide oxidoreductase ResA
13_1_40cm_4_scaffold_4423_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7734..8114)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000371E48D
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_4423_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8235..8594
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_4423_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8591..9061)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93094.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
13_1_40cm_4_scaffold_4423_12
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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9112..9480
DNA (369bp) protein (123aa)
Putative transcriptional regulator, ModE family n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEL3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHE91095.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="
ModE family transcriptional regulator
13_1_40cm_4_scaffold_4423_13
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9575..10465
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA87510.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
phosphate-selective porin
13_1_40cm_4_scaffold_4423_14
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10467..11351
DNA (885bp) protein (295aa)
Extracellular solute-binding protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S053_THEOJ
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:ADL06981.1}; Flags: Precursor;; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III
13_1_40cm_4_scaffold_4423_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11482..12810
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Eimeria maxima RepID=U6M5K1_EIMMA
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_4423_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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12807..14120
DNA (1314bp) protein (438aa)
Amino acid permease-associated region, putative n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJZ1_9CHRO
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative permease
13_1_40cm_4_scaffold_4423_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14201..16024
DNA (1824bp) protein (608aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nadE; NH(3)-dependent NAD (+) synthetase (EC:6.3.5.1)
NH(3)-dependent NAD (+) synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM9_GEMAT
13_1_40cm_4_scaffold_4423_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16024..16509
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thioesterase superfamily protein
13_1_40cm_4_scaffold_4423_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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16520..17311
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_4423_20
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17308..18339)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSQ9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21329.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
13_1_40cm_4_scaffold_4423_21
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

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18380..18784
DNA (405bp) protein (135aa)
signal-transduction protein Tax=RBG_16_Chloroflexi_51_16_curated
signal-transduction protein id=1245892 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_4423_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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18813..19229
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5E0E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF2203
13_1_40cm_4_scaffold_4423_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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19226..19681
DNA (456bp) protein (152aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_4423_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(19703..20554)
DNA (852bp) protein (284aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein kinase
Displaying 24 items

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