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13_1_40cm_4_scaffold_4541

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4541_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(2..262)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:BAM01017.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
hypothetical protein
13_1_40cm_4_scaffold_4541_2
unknown

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comp(364..777)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_4_scaffold_4541_3
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(802..1914)
DNA (1113bp) protein (371aa)
putative copper-binding protein n=1 Tax=Streptomyces chartreusis RepID=UPI000262E6ED
Hypothetical conserved protein {ECO:0000313|EMBL:BAL59339.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
13_1_40cm_4_scaffold_4541_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2027..2518)
DNA (492bp) protein (164aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9D5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89902.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4541_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2905..3225
DNA (321bp) protein (107aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D563_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RNA polymerase sigma factor
13_1_40cm_4_scaffold_4541_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3227..4024
DNA (798bp) protein (266aa)
Putative transmembrane anti-sigma factor n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGR1_COLFT
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:AHG92677.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4541_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4110..4592
DNA (483bp) protein (161aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGL7_CHIPD
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACU61722.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitino
13_1_40cm_4_scaffold_4541_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4670..5221
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XV7_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85508.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_4541_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5211..5762)
DNA (552bp) protein (184aa)
DSBA oxidoreductase n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002FB0CEE
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AIF83220.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus
13_1_40cm_4_scaffold_4541_10
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5759..6265)
DNA (507bp) protein (169aa)
Peroxiredoxin n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AK78_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELY98771.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
AhpC/TSA family protein
13_1_40cm_4_scaffold_4541_11
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6281..6760)
DNA (480bp) protein (160aa)
DSBA oxidoreductase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M1B3_ANAVT
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABA25230.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
13_1_40cm_4_scaffold_4541_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6847..7209)
DNA (363bp) protein (121aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91743.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4541_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7531..8445
DNA (915bp) protein (305aa)
Serine protease n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QEF0_9CYAN
PDZ/DHR/GLGF domain protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AHG88993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4541_14
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

8442..9056
DNA (615bp) protein (205aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T4S2_9CYAN
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AFY77505.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
13_1_40cm_4_scaffold_4541_15
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

9053..9700
DNA (648bp) protein (216aa)
Two component LuxR family transcriptional regulator n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QI08_9CYAN
two component LuxR family transcriptional regulator
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:AGY57259.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter ki
13_1_40cm_4_scaffold_4541_16
unknown

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comp(9731..10030)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_4541_17
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10102..11640)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PNH0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG84964.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
13_1_40cm_4_scaffold_4541_18
unknown

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11852..12295
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_4541_19

Not on your lists

comp(12341..13816)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I617_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHN97966.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
RND efflux system, outer membrane lipoprotein, NodT family
13_1_40cm_4_scaffold_4541_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13809..16901)
DNA (3093bp) protein (1031aa)
Putative RND efflux system, multidrug resistance protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU1_9BACT
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AHG88214.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4541_21
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16915..18015)
DNA (1101bp) protein (367aa)
membrane protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E20
putative RND efflux system, membrane fusion protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
efflux transporter, RND family, MFP subunit
13_1_40cm_4_scaffold_4541_22
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18252..19151)
DNA (900bp) protein (300aa)
NAD(P)H azoreductase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LA09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:BAR58131.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
FMN-dependent NADH-azoreductase
13_1_40cm_4_scaffold_4541_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19697..20665
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003677334
phosphate-responsive 1 family protein
Phosphate-responsive 1 family protein {ECO:0000313|EMBL:AHG93749.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4541_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(20723..21712)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003702B28
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Displaying 24 items

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