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13_1_40cm_4_scaffold_4433

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4433_1
unknown

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comp(2..292)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_4433_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(369..1151)
DNA (783bp) protein (261aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_4433_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1154..1906)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase-like, ParA/MinD
13_1_40cm_4_scaffold_4433_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2271..2624)
DNA (354bp) protein (118aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_4433_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

2820..3608
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=2 Tax=Dehalococcoides mccartyi RepID=D3SKA9_DEHSG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
13_1_40cm_4_scaffold_4433_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3624..5090)
DNA (1467bp) protein (489aa)
hypothetical protein; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBZ2_MYXSD
hypothetical protein
13_1_40cm_4_scaffold_4433_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

5167..5976
DNA (810bp) protein (270aa)
Zn-dependent hydrolase, glyoxylase id=24456897 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Zn-dependent hydrolase, glyoxylase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Zn-dependent hydrolase, glyoxylase
13_1_40cm_4_scaffold_4433_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5963..6976)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoesterase RecJ domain protein
13_1_40cm_4_scaffold_4433_9
unknown

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comp(7073..7483)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_4433_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7628..9106)
DNA (1479bp) protein (493aa)
Amino acid permease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAV9_MYXSD
amino acid permease Tax=GWC2_Gemmatimonadetes_71_10_curated
amino acid permease
13_1_40cm_4_scaffold_4433_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9182..10003)
DNA (822bp) protein (274aa)
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=R9S575_SIMAS
response regulator of the LytR/AlgR family Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
AlgR/AgrA/LytR family regulatory protein RpfD
13_1_40cm_4_scaffold_4433_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10025..11461)
DNA (1437bp) protein (479aa)
Amino acid permease-associated region n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T9A8_BURPP
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid permease-associated protein
13_1_40cm_4_scaffold_4433_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11548..11850)
DNA (303bp) protein (101aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
13_1_40cm_4_scaffold_4433_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11859..12998)
DNA (1140bp) protein (380aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
IMP dehydrogenase
13_1_40cm_4_scaffold_4433_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13007..13342)
DNA (336bp) protein (112aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
13_1_40cm_4_scaffold_4433_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13339..14391)
DNA (1053bp) protein (351aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_4433_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14551..15924
DNA (1374bp) protein (458aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_1_40cm_4_scaffold_4433_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15921..16643
DNA (723bp) protein (241aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_4433_19

Not on your lists

16631..17326
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
Marine sediment metagenome DNA, contig: S01H4_C01422 {ECO:0000313|EMBL:GAG68588.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_4433_20
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17319..17897
DNA (579bp) protein (193aa)
sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEG16442.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEG16442.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotom
Sulfate-transporting ATPase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJU9_DESK7
13_1_40cm_4_scaffold_4433_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17899..18294
DNA (396bp) protein (132aa)
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter ATP-binding protein; K06857 tungstate transport system ATP-binding protein id=14430717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
molybdate ABC transporter ATPase
13_1_40cm_4_scaffold_4433_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18297..18716
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV1_9SPHI
6-pyruvoyl tetrahydrobiopterin synthase
13_1_40cm_4_scaffold_4433_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18838..19557
DNA (720bp) protein (240aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
formate dehydrogenase
Formate dehydrogenase family accessory protein FdhD id=4638662 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_4_scaffold_4433_24
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19554..19967
DNA (414bp) protein (138aa)
Putative CoA-binding protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KR02_9BURK
Putative CoA-binding protein {ECO:0000313|EMBL:EJE53573.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. C
CoA-binding protein
13_1_40cm_4_scaffold_4433_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19970..20593
DNA (624bp) protein (208aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Molybdopterin-guanine dinucleotide biosynthesis protein A
Probable molybdenum cofactor guanylyltransferase id=3877310 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4433_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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20575..21066
DNA (492bp) protein (164aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHH0_MOOTA
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
13_1_40cm_4_scaffold_4433_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21068..22300
DNA (1233bp) protein (411aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
MoeA domain protein domain I and II
Molybdopterin molybdochelatase id=4324808 bin=GWF2_Syntrophobacterales_56_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_4433_28
unknown

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22300..22467
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 28 items

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