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13_1_40cm_4_scaffold_4564

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4564_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

122..370
DNA (249bp) protein (83aa)
phage integrase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
phage integrase protein (DNA breaking and rejoining enzyme)
Phage integrase protein (DNA breaking and rejoining enzyme) id=4701568 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_4564_trna_4
unknown

Not on your lists

comp(468..552)
DNA (85bp)
transferRNA
13_1_40cm_4_scaffold_4564_2
unknown

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787..1341
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_4_scaffold_4564_3
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1394..1846
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8R485_9BURK
Aldehyde dehydrogenase {ECO:0000313|EMBL:KAK44700.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiang
putative uncharacterized protein
13_1_40cm_4_scaffold_4564_4
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1859..3241)
DNA (1383bp) protein (461aa)
NAD(P)-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZQK5_PSEAC
Aldehyde dehydrogenase {ECO:0000313|EMBL:KIG17136.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_4564_5
unknown

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comp(3287..3490)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_4564_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4199..5659
DNA (1461bp) protein (487aa)
Mate efflux family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4N2_9BURK
mate efflux family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
mate efflux family protein
13_1_40cm_4_scaffold_4564_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5653..5841)
DNA (189bp) protein (63aa)
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
13_1_40cm_4_scaffold_4564_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6042..6551)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031E8EDD
Uncharacterized protein {ECO:0000313|EMBL:ETX07424.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_4_scaffold_4564_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6700..8511
DNA (1812bp) protein (604aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY4_9BACT
13_1_40cm_4_scaffold_4564_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8627..9727
DNA (1101bp) protein (367aa)
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY5_9BACT
13_1_40cm_4_scaffold_4564_11
unknown

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10148..10807
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_4_scaffold_4564_12
unknown

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11418..11531
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_4_scaffold_4564_trna_3
unknown

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comp(11465..11537)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_4564_trna_2
unknown

Not on your lists

comp(11565..11638)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_4564_trna_1
unknown

Not on your lists

comp(11660..11733)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_4564_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11758..12660)
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase id=4950928 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dTDP-4-dehydrorhamnose reductase Tax=GWC2_Rokubacteria_70_16_curated
dTDP-4-dehydrorhamnose reductase
13_1_40cm_4_scaffold_4564_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12672..13463)
DNA (792bp) protein (264aa)
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100) Tax=GWA2_Rokubacteria_73_35_curated
Short-chain dehydrogenase/reductase SDR id=3435260 bin=GWA2_Methylomirabilis_73_35 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
13_1_40cm_4_scaffold_4564_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13499..13999)
DNA (501bp) protein (167aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_4564_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13983..14594)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS68_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95855.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
13_1_40cm_4_scaffold_4564_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14591..15232)
DNA (642bp) protein (214aa)
Manganese and iron superoxide dismutase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBL1_ANADF
manganese and iron superoxide dismutase
Manganese and iron superoxide dismutase {ECO:0000313|EMBL:ABS26107.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_1_40cm_4_scaffold_4564_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15306..16487
DNA (1182bp) protein (394aa)
livK1; ABC-type branched-chain amino acid transport systems, periplasmic component Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid ABC transporter, amino acid-binding protein id=4734634 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_4564_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16487..17359
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345A3A9
Branched-chain amino acid ABC-type transport system, permease component Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_1_40cm_4_scaffold_4564_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17356..18270
DNA (915bp) protein (305aa)
putative branched-chain amino acid ABC transporter (permease protein) Tax=GWA2_Rokubacteria_73_35_curated
Inner-membrane translocator id=4734631 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type branched-chain amino acid transport system, permease component
13_1_40cm_4_scaffold_4564_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

18267..18626
DNA (360bp) protein (120aa)
ABC-type branched-chain amino acid transport systems, ATPase component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Branched-chain amino acid transport ATP-binding protein LivG id=4734630 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
Displaying 25 items

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