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13_1_40cm_4_scaffold_457

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_457_1
RBG_16_Archaea_50_20_curated, Archaea

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142..450
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Halobacterium sp. DL1 RepID=G4IAF8_9EURY
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Archaea_50_20_curated
rps10p; 30S ribosomal protein S10
13_1_40cm_4_scaffold_457_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(456..1964)
DNA (1509bp) protein (503aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3CTQ1_9ACTO
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_457_3
unknown

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comp(1987..2391)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_4

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comp(2596..3201)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B1FSZ0_9BURK id=53324 bin=ACD41 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD78545.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_457_5
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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3508..4407
DNA (900bp) protein (300aa)
Site-specific recombinase XerD n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH5_9ARCH
Site-specific recombinase XerD {ECO:0000313|EMBL:EMR73901.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
xerD; tyrosine recombinase XerD
13_1_40cm_4_scaffold_457_6
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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4762..5439
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AMX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP96370.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
13_1_40cm_4_scaffold_457_7
unknown

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comp(5454..6419)
DNA (966bp) protein (322aa)
hypothetical protein
13_1_40cm_4_scaffold_457_8
unknown

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comp(6416..7417)
DNA (1002bp) protein (334aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_9
unknown

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comp(7505..7801)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_10
unknown

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8364..9656
DNA (1293bp) protein (431aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_11
unknown

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10223..10744
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_12
unknown

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10798..11988
DNA (1191bp) protein (397aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_13
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(12355..13503)
DNA (1149bp) protein (383aa)
ATPase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UYK1_PYRAB
hypothetical protein
ATPase {ECO:0000313|EMBL:CCE70960.1}; Uncharacterized protein {ECO:0000313|EMBL:CAB50411.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" s
13_1_40cm_4_scaffold_457_14
unknown

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comp(13748..13918)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_15
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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comp(13915..14640)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0INN2_LEPFC
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
hypothetical protein
13_1_40cm_4_scaffold_457_16
unknown

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14695..14895
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14882..15265
DNA (384bp) protein (128aa)
Putative nickel-responsive regulator 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBN4_NITGG
nickel-responsive regulator 1
Putative nickel-responsive regulator 1 {ECO:0000313|EMBL:AFU56980.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_4_scaffold_457_18
unknown

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comp(15385..16317)
DNA (933bp) protein (311aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(16369..17136)
DNA (768bp) protein (256aa)
ABC-2 type transporter n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8R6Y0_DESM0
ABC transporter Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter
13_1_40cm_4_scaffold_457_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(17133..17945)
DNA (813bp) protein (271aa)
ABC transporter n=1 Tax=Thermofilum sp. 1910b RepID=S5ZX03_9CREN
ABC transporter Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter
13_1_40cm_4_scaffold_457_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(17908..18843)
DNA (936bp) protein (312aa)
ABC transporter related protein n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TE38_THEC1
ABC transporter Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter
13_1_40cm_4_scaffold_457_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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18976..19548
DNA (573bp) protein (191aa)
Nitroreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5J2_SPHTD
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACZ37508.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaer
13_1_40cm_4_scaffold_457_23

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comp(19584..20171)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI0003652F02
Uncharacterized protein {ECO:0000313|EMBL:KHO48411.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
threonyl/alanyl tRNA synthetase, SAD
13_1_40cm_4_scaffold_457_24
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

comp(20311..21138)
DNA (828bp) protein (276aa)
DhnA-type fructose-1,6-bisphosphate aldolase (EC:4.2.1.-); K08321 putative autoinducer-2 (AI-2) aldolase [EC:4.1.2.-] id=14427810 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
lsrF; putative aldolase LsrF (EC:4.1.2.-)
fructose-bisphosphate aldolase Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
13_1_40cm_4_scaffold_457_25
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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21374..22207
DNA (834bp) protein (278aa)
alpha/beta hydrolase; K01563 haloalkane dehalogenase [EC:3.8.1.5] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Haloalkane dehalogenase n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PJR9_MARAH
alpha/beta hydrolase fold protein
13_1_40cm_4_scaffold_457_26
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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22342..23430
DNA (1089bp) protein (363aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TS17_MARTH
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KEO83541.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellat
13_1_40cm_4_scaffold_457_27
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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23437..24447
DNA (1011bp) protein (337aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2C6_9CHLR
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EFH82794.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
hypothetical protein
13_1_40cm_4_scaffold_457_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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24607..25620
DNA (1014bp) protein (338aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 12-dioxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2C5_9CHLR
Homogentisate 12-dioxygenase {ECO:0000313|EMBL:EFH82793.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
13_1_40cm_4_scaffold_457_29
unknown

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comp(25692..26033)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_457_30
unknown

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comp(26191..26313)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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