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13_1_40cm_4_scaffold_4619

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4619_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

173..1429
DNA (1257bp) protein (419aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=SYY_ROSCS
Tyrosyl-tRNA synthetase
13_1_40cm_4_scaffold_4619_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1442..2116
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH80_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72308.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_4_scaffold_4619_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2153..2503)
DNA (351bp) protein (117aa)
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A624_GEMAT
putative aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative aminotransferase
13_1_40cm_4_scaffold_4619_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2497..3201)
DNA (705bp) protein (235aa)
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A624_GEMAT
putative aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
aminotransferase class V
13_1_40cm_4_scaffold_4619_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3278..4093)
DNA (816bp) protein (272aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A623_GEMAT
putative peptide ABC transporter permease protein
Putative peptide ABC transporter permease protein {ECO:0000313|EMBL:BAH37683.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatim
13_1_40cm_4_scaffold_4619_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4164..5246
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
Patatin
Patatin {ECO:0000313|EMBL:AHG91762.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4619_7
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5259..5867)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTX1_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW67904.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus
13_1_40cm_4_scaffold_4619_8
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(5954..6541)
DNA (588bp) protein (196aa)
glycosyl transferase family protein Tax=RBG_16_Planctomycetes_43_13_curated
Glycosyl transferase, family 11 id=2725987 bin=GWF2_Syntrophobacterales_56_9 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
glycosyl transferase family 11
13_1_40cm_4_scaffold_4619_9
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6793..7983)
DNA (1191bp) protein (397aa)
Glycosyl transferase group 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S3E1_9CYAN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY65147.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
13_1_40cm_4_scaffold_4619_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7980..8726)
DNA (747bp) protein (249aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase {ECO:0000313|EMBL:BAH40163.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH40163.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sou
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD6_GEMAT
13_1_40cm_4_scaffold_4619_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8823..9998)
DNA (1176bp) protein (392aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:ABC45158.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABC45158.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Glycosyl transferase, group 1 family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5V4_SALRD
glycoside hydrolase
13_1_40cm_4_scaffold_4619_12
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9995..11092)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00035E4FED
Glycosyltransferase Tax=RBG_16_Planctomycetes_64_12_curated
RfaG; glycosyltransferase
13_1_40cm_4_scaffold_4619_13
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

11226..12176
DNA (951bp) protein (317aa)
Glycosyl transferase, group 1 id=3446373 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
group 1 glycosyl transferase Tax=GWB1_Bdellovibrionales_55_8_curated
glycosyltransferase
13_1_40cm_4_scaffold_4619_14
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

12182..13129
DNA (948bp) protein (316aa)
Glycosyltransferase n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B1X6_PELLD
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABB24655.1}; TaxID=319225 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon lu
13_1_40cm_4_scaffold_4619_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13116..13580)
DNA (465bp) protein (155aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=2817611 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
spore maturation protein cgeB
13_1_40cm_4_scaffold_4619_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14050..14919)
DNA (870bp) protein (290aa)
glycosyltransferase id=7718165 bin=BACIGN_2 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58009.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
13_1_40cm_4_scaffold_4619_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14921..16723)
DNA (1803bp) protein (601aa)
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT
ABC transporter transmembrane region
13_1_40cm_4_scaffold_4619_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16725..18332)
DNA (1608bp) protein (536aa)
Putative response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A620_GEMAT
putative response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative response regulator
13_1_40cm_4_scaffold_4619_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18389..19384
DNA (996bp) protein (332aa)
Glycosyl transferase family 9 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV96_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW99321.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glycosyl transferase family 9
13_1_40cm_4_scaffold_4619_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19381..19731
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_4619_21
unknown

Not on your lists

19777..20454
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_4_scaffold_4619_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20459..21346
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A618_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_4619_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21366..22115
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein GAU_0635 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y635_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UPF0082 protein yeeN
13_1_40cm_4_scaffold_4619_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22117..22590
DNA (474bp) protein (158aa)
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A616_GEMAT
Crossover junction endodeoxyribonuclease ruvC
13_1_40cm_4_scaffold_4619_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22638..23186
DNA (549bp) protein (183aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036780A7
Holliday junction ATP-dependent DNA helicase ruvA
13_1_40cm_4_scaffold_4619_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23189..24292
DNA (1104bp) protein (368aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RUVB_GEMAT
ruvB; Holliday junction DNA helicase RuvB
13_1_40cm_4_scaffold_4619_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24374..25045
DNA (672bp) protein (224aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-) id=7200428 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
13_1_40cm_4_scaffold_4619_28
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25021..25377
DNA (357bp) protein (119aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6L0_DESAT
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
13_1_40cm_4_scaffold_4619_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25477..26601
DNA (1125bp) protein (375aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Queuine tRNA-ribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A609_GEMAT
Queuine tRNA-ribosyltransferase
13_1_40cm_4_scaffold_4619_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26598..26897
DNA (300bp) protein (100aa)
Preprotein translocase YajC subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A608_GEMAT
yajC; preprotein translocase YajC subunit; K03210 preprotein translocase subunit YajC Tax=RBG_16_Gemmatimonadetes_66_8_curated
yajC; preprotein translocase YajC subunit
Displaying 30 items

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