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13_1_40cm_4_scaffold_470

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_470_1
Bacillus sp. KSM-LD1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..235
DNA (234bp) protein (78aa)
SH protease n=1 Tax=Bacillus sp. KSM-LD1 RepID=A1IGW3_9BACI
SH protease {ECO:0000313|EMBL:BAF43311.1}; TaxID=196381 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. KSM-LD1.;"
peptidase S8 and S53 subtilisin kexin sedolisin
13_1_40cm_4_scaffold_470_2
unknown

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320..625
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_470_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(558..1397)
DNA (840bp) protein (280aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0S9_CONWI
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_470_4
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(1376..1897)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B657B1
radical SAM domain-containing protein Tax=RBG_16_Zixibacteria_53_22_curated
hypothetical protein
13_1_40cm_4_scaffold_470_5
unknown

Not on your lists

comp(1941..2687)
DNA (747bp) protein (249aa)

This feature has no annotations

13_1_40cm_4_scaffold_470_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(2752..3150)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037C4283
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AIE84830.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;"
13_1_40cm_4_scaffold_470_trna_1
unknown

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comp(3202..3285)
DNA (84bp)
transferRNA
13_1_40cm_4_scaffold_470_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3325..5631)
DNA (2307bp) protein (769aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SC86_PELPB
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein of unknown function DUF2723
13_1_40cm_4_scaffold_470_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5652..7832)
DNA (2181bp) protein (727aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V9_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_470_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7847..9412)
DNA (1566bp) protein (522aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.
Bifunctional purine biosynthesis protein PurH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W1_GEMAT
Bifunctional purine biosynthesis protein purH
13_1_40cm_4_scaffold_470_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9409..10494)
DNA (1086bp) protein (362aa)
Peptidase M42 family protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V126_TERSS
peptidase M42 family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase M42 family protein
13_1_40cm_4_scaffold_470_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10491..11432)
DNA (942bp) protein (314aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
Putative M42 glutamyl aminopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase family protein
13_1_40cm_4_scaffold_470_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11374..12060)
DNA (687bp) protein (229aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG23_RHOMR
phosphoribosylglycinamide formyltransferase
13_1_40cm_4_scaffold_470_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12057..12509)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000366AC81
gluconolactonase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trypsin-like serine protease with C-terminal PDZ domain
13_1_40cm_4_scaffold_470_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12532..13098)
DNA (567bp) protein (189aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6I7_HERA2
histidinol-phosphate phosphatase family protein
13_1_40cm_4_scaffold_470_15
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13091..14452)
DNA (1362bp) protein (454aa)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0M4_9DELT
selenocysteine synthase
Tax=BJP_IG2157_Desulfuromonadales_56_134
13_1_40cm_4_scaffold_470_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14449..15591)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_470_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(15668..18346)
DNA (2679bp) protein (893aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT
Valyl-tRNA synthetase
13_1_40cm_4_scaffold_470_18
unknown

Not on your lists

18483..18641
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_470_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18692..20563
DNA (1872bp) protein (624aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W7_GEMAT
13_1_40cm_4_scaffold_470_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20720..21913
DNA (1194bp) protein (398aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
13_1_40cm_4_scaffold_470_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21913..22476
DNA (564bp) protein (188aa)
BioY protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
BioY protein
13_1_40cm_4_scaffold_470_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

22499..23347
DNA (849bp) protein (283aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X3_GEMAT
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
13_1_40cm_4_scaffold_470_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23331..24476
DNA (1146bp) protein (382aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_470_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24415..25575
DNA (1161bp) protein (387aa)
leucine dehydrogenase (EC:1.4.1.9); K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Leucine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X5_GEMAT
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_4_scaffold_470_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25568..26005
DNA (438bp) protein (146aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
ribose 5-phosphate isomerase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B49713
13_1_40cm_4_scaffold_470_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26002..27288
DNA (1287bp) protein (429aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=GLYA_ANASK
13_1_40cm_4_scaffold_470_27
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

27278..27721
DNA (444bp) protein (148aa)
Putative heat shock protein, Hsp20 family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L020_THERP
heat shock protein Hsp20 family protein Tax=RBG_13_Chloroflexi_66_10_curated
putative heat shock protein, Hsp20 family
13_1_40cm_4_scaffold_470_28
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

27722..28933
DNA (1212bp) protein (404aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_13_Actinobacteria_55_18_curated
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLZ7_DESB2
Displaying 29 items

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