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13_1_40cm_4_scaffold_4792

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4792_1
Chondromyces crocatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1300
DNA (1299bp) protein (433aa)
Thioester reductase domain protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K603_9MYCO
Polyketide synthase {ECO:0000313|EMBL:CAQ18830.1}; TaxID=52 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces croc
polyketide synthase family protein
13_1_40cm_4_scaffold_4792_2
unknown

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1889..2143
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_4_scaffold_4792_trna_1
unknown

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comp(2105..2177)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_4792_3

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comp(2266..2874)
DNA (609bp) protein (203aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745967
molybdopterin-guanine dinucleotide biosynthesis protein A-like protein
13_1_40cm_4_scaffold_4792_4

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comp(2871..3347)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUD5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48632.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
molybdenum cofactor biosysynthesis protein
13_1_40cm_4_scaffold_4792_5

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3369..4178
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Nocardiopsis xinjiangensis RepID=UPI00035EDA09
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
fdhD; formate dehydrogenase accessory protein
13_1_40cm_4_scaffold_4792_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4228..6024)
DNA (1797bp) protein (599aa)
Glycosyl hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FD25_SORC5
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:CAN91720.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulo
13_1_40cm_4_scaffold_4792_7
unknown

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6036..6278
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_4792_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6409..6897
DNA (489bp) protein (163aa)
GCN5-related N-acetyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY00_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EDY21148.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_4792_9
unknown

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8167..8982
DNA (816bp) protein (272aa)

This feature has no annotations

13_1_40cm_4_scaffold_4792_10
unknown

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comp(9634..10173)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_4_scaffold_4792_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10181..10696)
DNA (516bp) protein (172aa)
Putative transmembrane anti-sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW58_9BACT
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EDY21650.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_4792_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10683..11294)
DNA (612bp) protein (204aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW59_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY21651.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_4792_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11323..11991)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW60_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDY21652.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_40cm_4_scaffold_4792_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12041..13123)
DNA (1083bp) protein (361aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW62_9BACT
Cfr family radical SAM protein
13_1_40cm_4_scaffold_4792_15
unknown

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comp(13765..14106)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_4792_16
unknown

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14304..14510
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_4792_17
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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14566..15270
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AT84_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP98225.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
13_1_40cm_4_scaffold_4792_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(15324..16112)
DNA (789bp) protein (263aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6A4_9BACT
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EDY18013.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cof; HAD superfamily hydrolase
13_1_40cm_4_scaffold_4792_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16256..16516
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6A5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18014.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_40cm_4_scaffold_4792_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(16549..17526)
DNA (978bp) protein (326aa)
Fatty acid desaturase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXT9_9BACT
Fatty acid desaturase {ECO:0000313|EMBL:EDY21087.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
mocD; hydrocarbon oxigenase
13_1_40cm_4_scaffold_4792_21
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17598..18215
DNA (618bp) protein (206aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036ACE68
13_1_40cm_4_scaffold_4792_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18239..18541
DNA (303bp) protein (101aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EDY21252.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EDY21252.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Ch
Ribose-phosphate diphosphokinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA4_9BACT
prsA; phosphoribosylpyrophosphate synthetase
13_1_40cm_4_scaffold_4792_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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18547..19290
DNA (744bp) protein (248aa)
50S ribosomal protein L25 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA3_9BACT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=497964 sp
50S ribosomal protein L25
13_1_40cm_4_scaffold_4792_24
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

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19381..19977
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TBA4_HELMI
Peptidyl-tRNA hydrolase Tax=GWA2_OP11_47_9
pth; peptidyl-tRNA hydrolase
13_1_40cm_4_scaffold_4792_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


19974..20225
DNA (252bp) protein (84aa)
30S ribosomal protein S6 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA1_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 26 items

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