name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_476_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
1..1542
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3708972 bin=GWA2_Methylomirabilis_73_35 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_476_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(1638..2015)
|
RNP-1 like RNA-binding protein id=3708973 bin=GWA2_Methylomirabilis_73_35 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative RNA-binding protein RbpA Tax=GWA2_Rokubacteria_73_35_curated
putative RNA-binding protein RbpA
|
|
13_1_40cm_4_scaffold_476_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(2188..3543)
|
two component sigma54 specific Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=14625085 bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Fis family transcriptional regulator
|
|
13_1_40cm_4_scaffold_476_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(3540..4916)
|
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Multi-sensor hybrid histidine kinase id=5037262 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two-component histidine kinase
|
|
13_1_40cm_4_scaffold_476_5
unknown
|
Not on your lists |
5216..6052
|
This feature has no annotations |
|
13_1_40cm_4_scaffold_476_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(5968..7563)
|
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] id=14625087 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
|
|
13_1_40cm_4_scaffold_476_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(7575..8882)
|
Amidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidase id=5037265 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Amidase
|
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13_1_40cm_4_scaffold_476_8
unknown
|
Not on your lists |
comp(8869..8976)
|
This feature has no annotations |
|
13_1_40cm_4_scaffold_476_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(8960..9493)
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shikimate dehydrogenase (EC:1.1.1.25) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aroK; shikimate kinase AroK (EC:2.7.1.71)
Shikimate kinase id=4780140 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_476_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9573..10298)
|
Vitamin B12 dependent methionine synthase activation region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Vitamin B12 dependent methionine synthase id=4780179 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Vitamin B12 dependent methionine synthase, activation domain protein
|
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13_1_40cm_4_scaffold_476_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(10295..10684)
|
Homocysteine S-methyltransferase id=4780181 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
homocysteine S-methyltransferase
|
|
13_1_40cm_4_scaffold_476_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(10684..11160)
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homocysteine S-methyltransferase id=4780181 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metH; 5-methyltetrahydrofolate--homocysteine methyltransferase
|
|
13_1_40cm_4_scaffold_476_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(11157..11834)
|
methyltransferase cognate corrinoid protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase cognate corrinoid protein id=14625094 bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methyltransferase cognate corrinoid protein
|
|
13_1_40cm_4_scaffold_476_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
11867..12631
|
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative beta-lactamase-like protein id=4780187 bin=GWA2_Methylomirabilis_73_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase domain-containing protein
|
|
13_1_40cm_4_scaffold_476_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(12649..13746)
|
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein id=14625100 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
|
|
13_1_40cm_4_scaffold_476_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(13743..14855)
|
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
major facilitator superfamily transporter id=14625101 bin=bin7_NC10_sister species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily transporter
|
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13_1_40cm_4_scaffold_476_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(14919..15203)
|
alkylhydroperoxidase like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alkylhydroperoxidase like protein, AhpD family id=2694168 bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_476_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(15228..15470)
|
hypothetical protein id=2694174 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
|
|
13_1_40cm_4_scaffold_476_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(15496..16410)
|
Putative aminopeptidase id=2694177 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative aminopeptidase Tax=GWA2_Rokubacteria_73_35_curated
putative aminopeptidase
|
|
13_1_40cm_4_scaffold_476_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(16407..17171)
|
hypothetical protein AATC3_01647 id=2694182 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
s-adenosylmethionine transferase Tax=GWA2_Rokubacteria_73_35_curated
putative ubiquinone/menaquinone biosynthesis methyltransferase
|
|
13_1_40cm_4_scaffold_476_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(17287..17523)
|
hypothetical protein id=2694184 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
|
|
13_1_40cm_4_scaffold_476_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(17530..17760)
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2694187 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_476_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
17787..18329
|
NUDIX hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NUDIX hydrolase id=2694190 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
|
|
13_1_40cm_4_scaffold_476_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(18338..19456)
|
Cys/Met metabolism pyridoxal-phosphate-dependent protein; K01739 cystathionine gamma-synthase [EC:2.5.1.48] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNU9_MARHT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
|
|
13_1_40cm_4_scaffold_476_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(19534..20298)
|
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (EC:1.1.1.-) id=14625119 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (EC:1.1.1.-) Tax=CSP1_6_Rokubacteria
short-chain dehydrogenase/reductase SDR
|
|
13_1_40cm_4_scaffold_476_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(20306..21679)
|
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] id=14625120 bin=bin7_NC10_sister species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=CSP1_6_Rokubacteria
glutamine synthetase
|
|
13_1_40cm_4_scaffold_476_27
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria
|
Not on your lists |
21734..23062
|
Permease of the major facilitator superfamily-like protein n=2 Tax=Chloroflexus RepID=A9WGR7_CHLAA
major facilitator superfamily permease
Permease of the major facilitator superfamily-like protein {ECO:0000313|EMBL:ABY36233.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; C
|
|
13_1_40cm_4_scaffold_476_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(23076..24260)
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14625121 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_476_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(24270..24713)
|
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rnc; ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] id=14625122 bin=bin7_NC10_sister species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ribonuclease III
|
|
13_1_40cm_4_scaffold_476_30
R_Rokubacteria_69_13, Rokubacteria, Bacteria
|
Not on your lists |
comp(24714..25952)
|
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=2638134 bin=GWF2_Methylomirabilis_70_14 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-(acyl-carrier-protein) synthase 2
|