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13_1_40cm_4_scaffold_4913

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4913_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2..373)
DNA (372bp) protein (124aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
Tyrosine--tRNA ligase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFB9_ACIB4
tyrosyl-tRNA synthetase
13_1_40cm_4_scaffold_4913_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(386..526)
DNA (141bp) protein (47aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_4913_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(788..1537)
DNA (750bp) protein (250aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
tRNA-splicing ligase RtcB n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWU9_THEPD
hypothetical protein
13_1_40cm_4_scaffold_4913_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(2356..2799)
DNA (444bp) protein (148aa)
Putative archease protein family (DUF101/UPF0211) n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA3_NITGG
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_4913_trna_1
unknown

Not on your lists

2951..3039
DNA (89bp)
transferRNA
13_1_40cm_4_scaffold_4913_5
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(3419..4117)
DNA (699bp) protein (233aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ACP34844.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ACP34844.1};; EC=4.2.1.17 {ECO:0000313|EMBL:ACP34844.1};; TaxID=429572 species="Archaea; Crena
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein n=1 Tax=Sulfolobus islandicus (strain L.D.8.5 / Lassen #2) RepID=D2PIV5_SULID
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_4_scaffold_4913_6
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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4241..5098
DNA (858bp) protein (286aa)
HD domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKY9_9BACT
HD domain protein {ECO:0000313|EMBL:BAL56825.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_4913_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5291..5434)
DNA (144bp) protein (48aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=AR5
13_1_40cm_4_scaffold_4913_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(5421..5612)
DNA (192bp) protein (64aa)
deoxyribonuclease/rho motif-related TRAM Tax=CG_Aenigma_01
deoxyribonuclease/rho motif-related TRAM
deoxyribonuclease/rho motif-related TRAM id=5241628 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_4_scaffold_4913_9
unknown

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comp(5624..5767)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_4_scaffold_4913_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6450..6902)
DNA (453bp) protein (151aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_4_scaffold_4913_11
unknown

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6945..7757
DNA (813bp) protein (271aa)

This feature has no annotations

13_1_40cm_4_scaffold_4913_12
RBG_16_Archaea_50_20_curated, Archaea

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7939..10029
DNA (2091bp) protein (697aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=RBG_16_Archaea_50_20_curated
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW97_METFV
13_1_40cm_4_scaffold_4913_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10242..11186
DNA (945bp) protein (315aa)
ABC-type metal ion transporter, periplasmic subunit n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B4B7_DESCC
ABC-type metal ion transport system, periplasmic component/surface adhesin {ECO:0000313|EMBL:KCZ73164.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus
heavy metal ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_4913_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

11173..11928
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] id=14631712 bin=bin9_gal15 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=CSP1_3_Armatimonadetes
polyamine-transporting ATPase (EC:3.6.3.31)
13_1_40cm_4_scaffold_4913_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11954..12745
DNA (792bp) protein (264aa)
ABC-type Mn2+/Zn2+ transport system, permease component {ECO:0000313|EMBL:KCZ73162.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae
putative Zinc uptake transporter, permease protein
ATP-binding domain-containing protein; K09816 zinc transport system permease protein id=14427249 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_4913_16
uncultured marine crenarchaeote HF4000_APKG9P22, Nitrosopumilales, Thaumarchaeota, Archaea

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12841..13224
DNA (384bp) protein (128aa)
Putative Ribbon-helix-helix protein, copG family protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG9P22 RepID=B3TBL3_9ARCH
Putative Ribbon-helix-helix protein, copG family protein {ECO:0000313|EMBL:ABZ09972.1}; TaxID=455609 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured mar
CopG family transcriptional regulator
13_1_40cm_4_scaffold_4913_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13266..14069)
DNA (804bp) protein (268aa)
aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RBG_16_Archaea_50_20_curated
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFV6_ACIB4
13_1_40cm_4_scaffold_4913_18
unknown

Not on your lists

14119..14619
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_4_scaffold_4913_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14616..15080
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDS2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59536.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_4913_20
unknown

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comp(15077..15466)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_4913_21
unknown

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comp(15595..15822)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_4913_22
unknown

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comp(15827..16027)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_4913_23
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(16099..16704)
DNA (606bp) protein (202aa)
UPF0215 protein MTH_1316 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y1316_METTH
hypothetical protein; K09120 hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4913_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16661..17854)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI00036CE438
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 Tax=RBG_13_Bathyarchaeota_46_16b_curated
cell division control protein Cdc6
13_1_40cm_4_scaffold_4913_25
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

18358..19359
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037C7725
Low-affinity inorganic phosphate transporter like protein Tax=CG_Elusi_01
Low-affinity inorganic phosphate transporter like protein
13_1_40cm_4_scaffold_4913_26
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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19554..20624
DNA (1071bp) protein (357aa)
Peptidase M24 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7T7_SPHTD
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ACZ37920.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
13_1_40cm_4_scaffold_4913_27
unknown

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comp(20743..21015)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_4_scaffold_4913_28
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(21684..23156)
DNA (1473bp) protein (491aa)
Serine/threonine protein kinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ2_9BACT
hypothetical protein Tax=RBG_16_Chloroflexi_52_11_curated
hypothetical protein
13_1_40cm_4_scaffold_4913_29
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23245..23928)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR84_KORVE id=5224305 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
hypothetical protein
Displaying items 1-30 of 33 in total

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