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13_1_40cm_4_scaffold_4929

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4929_1
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..245)
DNA (243bp) protein (81aa)
MaoC family dehydratase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378CF3
Dehydratase {ECO:0000313|EMBL:KEI46011.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
MaoC-like dehydratase
13_1_40cm_4_scaffold_4929_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242..1591)
DNA (1350bp) protein (450aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4Z7_GEOOG
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB73108.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatoph
13_1_40cm_4_scaffold_4929_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1588..2868)
DNA (1281bp) protein (427aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEA28276.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AEA28276.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc
Acetyl-CoA acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNH8_PSEUX
13_1_40cm_4_scaffold_4929_4
unknown

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comp(3103..3513)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_5
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4374..4790
DNA (417bp) protein (139aa)
Acyl-CoA dehydrogenase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MYQ8_SACVD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ACU98147.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (str
13_1_40cm_4_scaffold_4929_6

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comp(4787..5191)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SC49_INTC7 id=5103446 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62727.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
13_1_40cm_4_scaffold_4929_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5184..5798)
DNA (615bp) protein (205aa)
Putative uncharacterized protein id=3674487 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Putative uncharacterized protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
13_1_40cm_4_scaffold_4929_8
unknown

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comp(5884..7125)
DNA (1242bp) protein (414aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7631..8746)
DNA (1116bp) protein (372aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="
Glycoside hydrolase family 5 n=1 Tax=Frankia sp. CN3 RepID=G6HB66_9ACTO
Cellulase (Glycosyl hydrolase 5) with CBM domain
13_1_40cm_4_scaffold_4929_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(8824..9714)
DNA (891bp) protein (297aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJT3_RHOM4
NAD-dependent epimerase/dehydratase Tax=RBG_16_Euryarchaeota_41_19_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_4929_11
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(9786..11081)
DNA (1296bp) protein (432aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RBG_16_Chloroflexi_57_9_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G763_CHLAD
13_1_40cm_4_scaffold_4929_12
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

11172..12104
DNA (933bp) protein (311aa)
putative S8 family peptidase; K14645 serine protease [EC:3.4.21.-] Tax=RBG_13_OP11_40_15_curated
13_1_40cm_4_scaffold_4929_13
unknown

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comp(11935..12498)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_14
unknown

Not on your lists

comp(12556..13230)
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_15
unknown

Not on your lists

13513..14007
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_16

Not on your lists

14066..15106
DNA (1041bp) protein (347aa)
rci:RCIX200 rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=95846 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dTDP-glucose 4,6-dehydratase
13_1_40cm_4_scaffold_4929_17
unknown

Not on your lists

15179..16279
DNA (1101bp) protein (367aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_18
Curtobacterium sp. B18, Curtobacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16276..16509)
DNA (234bp) protein (78aa)
glycosyl transferase n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003459523
13_1_40cm_4_scaffold_4929_19
unknown

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16818..17129
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_20
unknown

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comp(17140..17700)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_4_scaffold_4929_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17706..19097)
DNA (1392bp) protein (464aa)
High-affinity nickel-transporter n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QEU4_CATAD
high-affinity nickel-transporter Tax=RBG_16_Actinobacteria_68_12_curated
high-affinity nickel-transporter
13_1_40cm_4_scaffold_4929_22
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(19094..20383)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Tu6071 RepID=F3Z9I6_9ACTO
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein
13_1_40cm_4_scaffold_4929_23
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(20440..21840)
DNA (1401bp) protein (467aa)
hypothetical protein id=17418201 bin=RBG_16_Aminicenantes_66_30 species=Kribbella catacumbae genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_16_Aminicenantes_66_30_curated
hypothetical protein
13_1_40cm_4_scaffold_4929_24
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

22262..23383
DNA (1122bp) protein (374aa)
Amino acid permease-associated region n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B9H6_ACIHW
Amino acid permease {ECO:0000313|EMBL:EZQ01777.1}; TaxID=1160895 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Candidatus Acidianus copahuensis.;"
amino acid permease-associated protein
13_1_40cm_4_scaffold_4929_25
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

23692..23988
DNA (297bp) protein (99aa)
plastocyanin Tax=RBG_16_KB1_OP1_55_9_curated
copper binding protein of plastocyanin/azurin family
13_1_40cm_4_scaffold_4929_26
unknown

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24088..24159
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 26 items

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