ggKbase home page

13_1_40cm_4_scaffold_522

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_522_1
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(325..639)
DNA (315bp) protein (105aa)
Transcriptional regulator, ArsR family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0U2_9CYAN
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFY88243.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;
13_1_40cm_4_scaffold_522_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

782..1138
DNA (357bp) protein (119aa)
LBCA THIOREDOXIN n=1 Tax=synthetic construct RepID=UPI00038A5F74
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Ana
13_1_40cm_4_scaffold_522_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(1328..3277)
DNA (1950bp) protein (650aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCE8_THET1
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ACZ42463.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_4_scaffold_522_4
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3523..3885)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BDD0_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH60377.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
13_1_40cm_4_scaffold_522_5
unknown

Not on your lists

4669..5259
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_6
unknown

Not on your lists

5278..5841
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_7
unknown

Not on your lists

comp(5870..6028)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_8
unknown

Not on your lists

6045..6185
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_9
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

6226..8625
DNA (2400bp) protein (800aa)
Probable aminopeptidase 2 n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=APE2_SULTO
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:EWG07574.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales
aminopeptidase
13_1_40cm_4_scaffold_522_trna_2
unknown

Not on your lists

comp(8717..8837)
DNA (121bp)
transferRNA
13_1_40cm_4_scaffold_522_10
unknown

Not on your lists

comp(8912..9172)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_11
unknown

Not on your lists

comp(9175..9444)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10977..13196)
DNA (2220bp) protein (740aa)
ATPase AAA n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TC18_9EURY
AAA family ATPase, CDC48 subfamily
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AIF84648.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Cand
13_1_40cm_4_scaffold_522_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13436..13792
DNA (357bp) protein (119aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2P4_9ARCH
Sjogrens syndrome scleroderma autoantigen 1; K07143 UPF0148 protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_522_14
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(13787..14074)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6R0_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47979.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_4_scaffold_522_15
unknown

Not on your lists

comp(14153..14746)
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_16
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(14761..16032)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGL0_PYRYC
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_40cm_4_scaffold_522_17
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(16042..16995)
DNA (954bp) protein (318aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDS6_ACIB4
ATPase AAA
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ADD08156.1}; ATPase, AAA family, putative {ECO:0000313|EMBL:EDY35578.1}; TaxID=439481 species="Archaea; Euryarchaeota; Acidul
13_1_40cm_4_scaffold_522_18
unknown

Not on your lists

comp(16992..17282)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17507..18415)
DNA (909bp) protein (303aa)
hypothetical protein, partial n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00036633C3
Uncharacterized protein {ECO:0000313|EMBL:ETW96585.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_40cm_4_scaffold_522_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18494..18772)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00036F9E47
hypothetical protein; K09721 hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_522_21
unknown

Not on your lists

19124..19717
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_22
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(19734..20330)
DNA (597bp) protein (199aa)
tmk; dTMP kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVZ2_9ARCH
thymidylate kinase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_4_scaffold_522_trna_1
unknown

Not on your lists

comp(20432..20549)
DNA (118bp)
transferRNA
13_1_40cm_4_scaffold_522_23
unknown

Not on your lists

21005..21262
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_24
unknown

Not on your lists

comp(21447..21782)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_25
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

22962..23345
DNA (384bp) protein (128aa)
Metallothiol transferase fosB (EC:2.5.1.-)
hypothetical protein Tax=RBG_16_Planctomycetes_59_8_curated
13_1_40cm_4_scaffold_522_26
unknown

Not on your lists

comp(23342..23797)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_27
unknown

Not on your lists

comp(23800..24282)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_4_scaffold_522_28
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24399..25280)
DNA (882bp) protein (294aa)
Peptidase A4 family protein (EC:3.4.23.19)
Peptidase A4 family protein {ECO:0000313|EMBL:AKB44257.1}; EC=3.4.23.19 {ECO:0000313|EMBL:AKB44257.1};; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcin
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI000376212D
Displaying items 1-30 of 36 in total

View Taxonomy