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13_1_40cm_4_scaffold_55

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_55_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2..397)
DNA (396bp) protein (132aa)
Uncharacterized protein id=4213232 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
amino acid oxidase Tax=GWC2_RIF_CHLX_73_18_curated
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_55_2
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

501..2054
DNA (1554bp) protein (518aa)
AMP-dependent synthetase and ligase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBU9_9CHLR
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFO81329.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" so
AMP-dependent synthetase and ligase
13_1_40cm_4_scaffold_55_3
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2057..3028
DNA (972bp) protein (324aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhod
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Sagittula stellata E-37 RepID=A3KB65_9RHOB
13_1_40cm_4_scaffold_55_4
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3017..3688)
DNA (672bp) protein (224aa)
GntR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B34BD8
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACV58626.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus
13_1_40cm_4_scaffold_55_5
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3763..5076
DNA (1314bp) protein (438aa)
Extracellular ligand-binding receptor n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V2K5_MYCVA
Receptor family ligand binding region {ECO:0000313|EMBL:KJE76489.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Fer
Extracellular ligand-binding receptor
13_1_40cm_4_scaffold_55_6
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5108..5992
DNA (885bp) protein (295aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UJT1_MYCVA
Inner-membrane translocator {ECO:0000313|EMBL:EJZ05245.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 2595
inner-membrane translocator
13_1_40cm_4_scaffold_55_7
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5989..6978
DNA (990bp) protein (330aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UEB8_MYCVA
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:KJE76491.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobi
inner-membrane translocator
13_1_40cm_4_scaffold_55_8
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6962..7750
DNA (789bp) protein (263aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UD89_MYCVA
ABC transporter-like protein {ECO:0000313|EMBL:EJZ05247.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 259
ABC transporter-like protein
13_1_40cm_4_scaffold_55_9
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7725..8531
DNA (807bp) protein (269aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0URK1_MYCVA
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJE76494.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrob
ABC transporter
13_1_40cm_4_scaffold_55_10
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8528..9451
DNA (924bp) protein (308aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase {ECO:0000313|EMBL:ABQ92287.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ABQ92287.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales;
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V084_ROSS1
13_1_40cm_4_scaffold_55_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(9422..10729)
DNA (1308bp) protein (436aa)
HD domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXP0_THERP
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ACM05977.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 2750
13_1_40cm_4_scaffold_55_12
unknown

Not on your lists

comp(10748..10975)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_55_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11265..12086
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MVW8_9ACTO
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACU75355.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
13_1_40cm_4_scaffold_55_14
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12083..13357
DNA (1275bp) protein (425aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSB5_ACIC1
extracellular solute-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABK52325.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; A
13_1_40cm_4_scaffold_55_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13386..14354
DNA (969bp) protein (323aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSB6_ACIC1
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABK52326.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Aci
13_1_40cm_4_scaffold_55_16
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14351..15181
DNA (831bp) protein (277aa)
Sugar binding-protein-dependent transporter n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NMX8_9ACTO
Sugar binding-protein-dependent transporter {ECO:0000313|EMBL:EGG45164.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gri
putative sugar ABC transporter permease protein
13_1_40cm_4_scaffold_55_17
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15184..16632
DNA (1449bp) protein (483aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strepto
Putative sugar hydrolase n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K4U1_STREN
sugar hydrolase
13_1_40cm_4_scaffold_55_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16632..17495
DNA (864bp) protein (288aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
N-acetylmuramic acid-6-phosphate etherase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B2FA69
murQ; N-acetylmuramic acid 6-phosphate etherase
13_1_40cm_4_scaffold_55_19
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

17492..18613
DNA (1122bp) protein (374aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=926550 species=
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8P9_CALAS
nagA; N-acetylglucosamine-6-phosphate deacetylase
13_1_40cm_4_scaffold_55_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18610..19644
DNA (1035bp) protein (345aa)
glutamine--fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate transaminase (Isomerizing) {ECO:0000313|EMBL:ACZ39491.1}; EC=2.6.1.16 {ECO:0000313|EMBL:ACZ39491.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sp
Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5T9_SPHTD
13_1_40cm_4_scaffold_55_21
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19641..20513
DNA (873bp) protein (291aa)
BadF/BadG/BcrA/BcrD type ATPase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F253_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:GAJ83092.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
BadF/BadG/BcrA/BcrD type ATPase
13_1_40cm_4_scaffold_55_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(20607..21467)
DNA (861bp) protein (287aa)
Aldo/keto reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRN8_9CHLR
Aldo/keto reductase {ECO:0000313|EMBL:EFH85990.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
aldo/keto reductase
13_1_40cm_4_scaffold_55_23
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21472..22530)
DNA (1059bp) protein (353aa)
yurJ; putative ABC transporter ATP-binding protein YurJ (EC:3.6.3.-)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYW3_THEOJ
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGG80247.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaer
13_1_40cm_4_scaffold_55_24
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(22538..23491)
DNA (954bp) protein (318aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum
Galactose-1-phosphate uridylyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEW7_THET1
13_1_40cm_4_scaffold_55_25
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23629..24429)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PQU1_9ACTO
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KIH96834.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora
putative DeoR-family transcriptional regulator
13_1_40cm_4_scaffold_55_26
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

24590..25975
DNA (1386bp) protein (462aa)
Tat pathway signal sequence domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KKT7_9ACTO
ABC transporter solute-binding protein Tax=RBG_16_RIF_CHLX_69_14_curated
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_55_27
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

25998..26633
DNA (636bp) protein (212aa)
ABC transporter permease n=1 Tax=Humibacter albus RepID=UPI0003B3EFD1
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=RBG_16_RIF_CHLX_69_14_curated
binding-protein-dependent transporters inner membrane component
Displaying 27 items

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