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13_1_40cm_4_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_545_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(460..660)
DNA (201bp) protein (67aa)
Putative recombinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH74_9BACT
recombinase
Putative recombinase {ECO:0000313|EMBL:CBE69106.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_4_scaffold_545_2
unknown

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comp(888..1082)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_545_3
unknown

Not on your lists

comp(1180..1728)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_4_scaffold_545_4
unknown

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2230..2475
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_545_5
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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comp(2551..2961)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0R0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY88682.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_1_40cm_4_scaffold_545_6
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2958..3431)
DNA (474bp) protein (158aa)
Putative doxX family protein n=1 Tax=Bacillus amyloliquefaciens subsp. plantarum UCMB5113 RepID=S6FP82_BACAM
Putative doxX family protein
Putative doxX family protein {ECO:0000313|EMBL:CDG28463.1}; TaxID=1338518 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens subsp. plantar
13_1_40cm_4_scaffold_545_7
unknown

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comp(3428..3733)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_545_8
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3785..4381)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00035D88F7
TetR family transcriptional regulator
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_40cm_4_scaffold_545_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4904..5704
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Transcriptional regulator, IclR family id=14625722 bin=bin7_NC10_sister species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
iclR; transcriptional regulator, IclR family
13_1_40cm_4_scaffold_545_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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6027..6458
DNA (432bp) protein (144aa)
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=CSP1_6_Rokubacteria
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] id=14625715 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
13_1_40cm_4_scaffold_545_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6463..7224
DNA (762bp) protein (254aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] id=14625717 bin=bin7_NC10_sister species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=CSP1_6_Rokubacteria
gno; gluconate 5-dehydrogenase (EC:1.1.1.69)
13_1_40cm_4_scaffold_545_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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7221..8669
DNA (1449bp) protein (483aa)
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] id=14625706 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] Tax=CSP1_6_Rokubacteria
carboxylase
13_1_40cm_4_scaffold_545_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

8670..10052
DNA (1383bp) protein (461aa)
hypothetical protein id=14625714 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_545_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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10049..11047
DNA (999bp) protein (333aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; K02051 NitT/TauT family transport system substrate-binding protein id=14625711 bin=bin7_NC10_sister species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
family 3 extracellular solute-binding protein
13_1_40cm_4_scaffold_545_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11056..11895
DNA (840bp) protein (280aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C8I9_DESTA
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:AFM27787.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syn
13_1_40cm_4_scaffold_545_16
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11892..12638
DNA (747bp) protein (249aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDZ7_DESTA
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Tax=RBG_13_Deltaproteobacteria_51_10_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
13_1_40cm_4_scaffold_545_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12635..14041
DNA (1407bp) protein (469aa)
carboxylase Tax=CSP1_6_Rokubacteria
carboxylase id=14625708 bin=bin7_NC10_sister species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxylase
13_1_40cm_4_scaffold_545_18
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14068..14880
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS03305.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
Short-chain dehydrogenase/reductase SDR id=4547902 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_40cm_4_scaffold_545_19
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(14922..15692)
DNA (771bp) protein (257aa)
ABC transporter related protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS28_METIM
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG13381.1}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methano
13_1_40cm_4_scaffold_545_20
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15698..16582)
DNA (885bp) protein (295aa)
Nitrate/sulfonate/bicarbonate ABC transporter permease n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PPI9_9BURK
nitrate/sulfonate/bicarbonate ABC transporter permease
Nitrate/sulfonate/bicarbonate ABC transporter permease {ECO:0000313|EMBL:AHB04866.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.
13_1_40cm_4_scaffold_545_21
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16620..17939)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PY76_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB08277.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa
13_1_40cm_4_scaffold_545_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(17965..20055)
DNA (2091bp) protein (697aa)
CoA-binding domain-containing protein id=14625700 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
CoA-binding domain-containing protein Tax=CSP1_6_Rokubacteria
CoA-binding domain-containing protein
13_1_40cm_4_scaffold_545_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20052..21185)
DNA (1134bp) protein (378aa)
Thiolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXR8_KYRT2
thiolase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
thiolase
13_1_40cm_4_scaffold_545_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21182..21598)
DNA (417bp) protein (139aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X746_9PSEU
hypothetical protein; K07068 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_40cm_4_scaffold_545_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(21595..23025)
DNA (1431bp) protein (477aa)
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] id=14625706 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate carboxylase subunit B; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3] Tax=CSP1_6_Rokubacteria
carboxylase
13_1_40cm_4_scaffold_545_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(23022..24380)
DNA (1359bp) protein (453aa)
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] id=14625707 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=CSP1_6_Rokubacteria
acetyl-CoA carboxylase subunit alpha (EC:6.4.1.1)
13_1_40cm_4_scaffold_545_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(24377..24856)
DNA (480bp) protein (160aa)
biotin carboxyl carrier protein id=14625716 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
biotin carboxyl carrier protein Tax=CSP1_6_Rokubacteria
biotin carboxyl carrier protein
13_1_40cm_4_scaffold_545_28
unknown

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comp(24871..24975)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_4_scaffold_545_29
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24972..25496)
DNA (525bp) protein (175aa)
putative TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase id=4770810 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative amidohydrolase
13_1_40cm_4_scaffold_545_30
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25493..25951)
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02402.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
Displaying items 1-30 of 40 in total

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