ggKbase home page

13_1_40cm_4_scaffold_5452

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5452_1
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..170
DNA (168bp) protein (56aa)
ABC transporter related protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NHT4_9FIRM
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=CG_Delta_02
ABC transporter-like protein
13_1_40cm_4_scaffold_5452_2
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

157..882
DNA (726bp) protein (242aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9M1_SPHTD
ABC transporter related Tax=MPF_Thermotogae_50_1627
ABC transporter
13_1_40cm_4_scaffold_5452_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1238..1651
DNA (414bp) protein (138aa)
id=14626280 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626280 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_5452_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1766..2335
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036A42D9
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
13_1_40cm_4_scaffold_5452_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2472..4136)
DNA (1665bp) protein (555aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627257 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
AAA ATPase central domain-containing protein
13_1_40cm_4_scaffold_5452_6
unknown

Not on your lists

comp(4150..4455)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_5452_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4625..5464)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036549B1
Uncharacterized protein {ECO:0000313|EMBL:EAQ77016.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
4Fe-4S ferredoxin
13_1_40cm_4_scaffold_5452_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5464..6939)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003778C70
cytochrome b/b6 domain protein
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:ADW69202.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (stra
13_1_40cm_4_scaffold_5452_9
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6939..7457)
DNA (519bp) protein (173aa)
Putative menaquinol:cytochrome c oxidoreductase (Iron-sulfur subunit) (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6PY61_9ZZZZ
Rieske (2Fe-2S) iron-sulfur domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEU37194.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella malle
13_1_40cm_4_scaffold_5452_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(7462..8202)
DNA (741bp) protein (247aa)
Cytochrome c, class I n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PC8_SOLUE
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABJ88492.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="S
13_1_40cm_4_scaffold_5452_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8199..9056)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037BA366
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88491.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_4_scaffold_5452_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9053..9958)
DNA (906bp) protein (302aa)
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase id=4083674 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5452_13

Not on your lists

comp(9975..10523)
DNA (549bp) protein (183aa)
Cytochrome c oxidase, subunit III {ECO:0000313|EMBL:CBH99873.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CBH99873.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source=
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036C8785
cytochrome c oxidase subunit III
13_1_40cm_4_scaffold_5452_14
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10586..11593)
DNA (1008bp) protein (336aa)
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudo
Catalase-related peroxidase n=3 Tax=Azotobacter vinelandii RepID=C1DJZ1_AZOVD
Catalase-related peroxidase
13_1_40cm_4_scaffold_5452_15
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11658..13337)
DNA (1680bp) protein (560aa)
cytochrome C oxidase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035CB92D
cytochrome C oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ADW69207.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (str
13_1_40cm_4_scaffold_5452_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13353..14327)
DNA (975bp) protein (325aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003775DF5
cytochrome c oxidase subunit II
13_1_40cm_4_scaffold_5452_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14623..15015
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=2884826 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_4_scaffold_5452_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15082..15444
DNA (363bp) protein (121aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) Tax=GWA2_Rokubacteria_70_23_curated
ATP-dependent zinc metalloprotease FtsH id=3615421 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ftsH; ATP-dependent metalloprotease FtsH
13_1_40cm_4_scaffold_5452_19
unknown

Not on your lists

comp(15567..15944)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_4_scaffold_5452_20
unknown

Not on your lists

comp(15960..16118)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_5452_21
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16344..18032
DNA (1689bp) protein (563aa)
Carbohydrate-binding family V/XII n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRU9_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI65679.1}; Flags: Precursor;; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulib
carbohydrate-binding family V/XII
13_1_40cm_4_scaffold_5452_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

18434..18898
DNA (465bp) protein (155aa)
id=14626280 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_5452_23
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18847..19155
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UF85_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV17122.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source
13_1_40cm_4_scaffold_5452_24
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19229..19507
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM44255.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
Displaying 24 items

View Taxonomy