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13_1_40cm_4_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_58_1

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1..1587
DNA (1587bp) protein (529aa)
Capsular exopolysaccharide family id=1251295 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Capsular exopolysaccharide family {ECO:0000313|EMBL:EQB64158.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
lipopolysaccharide biosynthesis protein
13_1_40cm_4_scaffold_58_2
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

1566..1889
DNA (324bp) protein (108aa)
Capsular exopolysaccharide family id=3623670 bin=GWF2_OP3_38_59 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
capsular polysaccharide biosynthesis protein Tax=CG_CP02_01
hypothetical protein
13_1_40cm_4_scaffold_58_3
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

1886..3229
DNA (1344bp) protein (448aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
UDP-glucose 6-dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XQ9_SOLUE id=5225362 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
nucleotide sugar dehydrogenase
13_1_40cm_4_scaffold_58_4
unknown

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comp(3226..3486)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_58_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3695..4015
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00036AC6AA
Polysaccharide deacetylase {ECO:0000313|EMBL:ETX01909.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
polysaccharide deactylase family protein
13_1_40cm_4_scaffold_58_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4012..4707
DNA (696bp) protein (232aa)
UDP-n-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=GWC2_Rokubacteria_70_16_curated
wecB; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase id=3453942 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_58_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4667..5065
DNA (399bp) protein (133aa)
UDP-n-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=GWC2_Rokubacteria_70_16_curated
UDP-N-acetylglucosamine 2-epimerase id=3453942 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UDP-N-acetylglucosamine 2-epimerase
13_1_40cm_4_scaffold_58_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5052..6074
DNA (1023bp) protein (341aa)
FemAB-related protein, PEP-CTERM system-associated id=3453940 bin=GWC2_Methylomirabilis_70_16 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FemAB-like protein, PEP-CTERM system-associated Tax=GWC2_Rokubacteria_70_16_curated
FemAB-like protein, PEP-CTERM system-associated
13_1_40cm_4_scaffold_58_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6102..7211
DNA (1110bp) protein (370aa)
FemAB superfamily protein id=3453935 bin=GWC2_Methylomirabilis_70_16 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FemAB superfamily protein Tax=GWC2_Rokubacteria_70_16_curated
cellulose biosynthesis (CelD) protein
13_1_40cm_4_scaffold_58_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7202..9034
DNA (1833bp) protein (611aa)
asn; asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RBG_16_Nitrospirae_64_22_curated
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Thauera terpenica 58Eu RepID=T0ASK3_9RHOO
13_1_40cm_4_scaffold_58_11
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9045..10094
DNA (1050bp) protein (350aa)
Polysaccharide deacetylase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSJ3_9GAMM
polysaccharide deacetylase Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
polysaccharide deacetylase
13_1_40cm_4_scaffold_58_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

10275..10787
DNA (513bp) protein (171aa)
putative transcription termination/antitermination factor NusG Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative Transcription termination/antitermination factor NusG id=2278851 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative transcription termination/antitermination factor NusG
13_1_40cm_4_scaffold_58_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10788..11672
DNA (885bp) protein (295aa)
ABC-2 type transporter n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G420_GEOUR
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uran
13_1_40cm_4_scaffold_58_14
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11656..12999
DNA (1344bp) protein (448aa)
ABC transporter, ATP-binding protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZCI3_9BACT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EAY31985.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina AT
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
13_1_40cm_4_scaffold_58_15
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

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13020..14039
DNA (1020bp) protein (340aa)
UPI0003D7A408 related cluster n=4 Tax=Aminicenantes RepID=UPI0003D7A408
oxidoreductase domain-containing protein
Oxidoreductase {ECO:0000313|EMBL:AKG53557.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
13_1_40cm_4_scaffold_58_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14036..14632
DNA (597bp) protein (199aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V902_THELD
transferase hexapeptide repeat containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transferase hexapeptide repeat containing protein
13_1_40cm_4_scaffold_58_17
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

14629..15762
DNA (1134bp) protein (378aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZXR0_MAHA5
Erythromycin biosynthesis sensory transduction protein eryC1 {ECO:0000313|EMBL:KGQ22401.1}; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Ther
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_40cm_4_scaffold_58_18
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15759..16715
DNA (957bp) protein (319aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Bacillus licheniformis (strain DSM 13 / ATCC 14580) RepID=Q65MH5_BACLD
ytcB; hypothetical protein Tax=CG_Delta_05
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_58_19
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16712..17854
DNA (1143bp) protein (381aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:BAK97740.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAK97740.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" sou
Aminotransferase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT88_OSCVS
13_1_40cm_4_scaffold_58_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17835..18170
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2I8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR36818.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT
13_1_40cm_4_scaffold_58_21
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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18184..18846
DNA (663bp) protein (221aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JYR2_SACES
Transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:CCH29844.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccha
13_1_40cm_4_scaffold_58_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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18843..19469
DNA (627bp) protein (209aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit id=4885416 bin=GWC2_Planctomycete_KSU_39_26 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
13_1_40cm_4_scaffold_58_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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19477..20304
DNA (828bp) protein (276aa)
hisF-1; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
imidazole glycerol phosphate synthase n=1 Tax=Methylotenera mobilis RepID=UPI000374710A
histidine biosynthesis protein
13_1_40cm_4_scaffold_58_24
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20301..21431
DNA (1131bp) protein (377aa)
LPS biosynthesis protein WbpG n=1 Tax=Methylotenera mobilis RepID=UPI0003626929
wbpG; LPS biosynthesis protein WbpG
LPS biosynthesis protein WbpG {ECO:0000313|EMBL:ABR91442.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthin
13_1_40cm_4_scaffold_58_25
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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21600..22889
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JC62_DESDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGB15635.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
13_1_40cm_4_scaffold_58_26
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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23205..24425
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNJ5_9BURK
hypothetical protein Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein
13_1_40cm_4_scaffold_58_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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24546..25526
DNA (981bp) protein (327aa)
hypothetical protein id=1318109 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
13_1_40cm_4_scaffold_58_28
unknown

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25527..25751
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_58_29
unknown

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25843..26340
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_4_scaffold_58_30
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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26351..27673
DNA (1323bp) protein (441aa)
Wzy family polymerase, exosortase system type 1 associated n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6U0_NITWC
wzy family polymerase
Wzy family polymerase, exosortase system type 1 associated {ECO:0000313|EMBL:ADJ28617.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcu
Displaying items 1-30 of 32 in total

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