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13_1_40cm_4_scaffold_572

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_572_1
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..404
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DC886
Fis family transcriptional regulator
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:ACS85068.1}; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya
13_1_40cm_4_scaffold_572_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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579..881
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379ABB2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
13_1_40cm_4_scaffold_572_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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878..1441
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361FD4D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41062.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_4_scaffold_572_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1438..2901
DNA (1464bp) protein (488aa)
Outer membrane efflux protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM03_KORVE
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABF42097.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_1_40cm_4_scaffold_572_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2901..4199
DNA (1299bp) protein (433aa)
Transporter, MFP family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6Y3_ACIC5
MFP family transporter
Transporter, MFP family {ECO:0000313|EMBL:ACO31409.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_1_40cm_4_scaffold_572_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4196..5788
DNA (1593bp) protein (531aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SW3_SOLUE
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABJ87257.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_4_scaffold_572_7
unknown

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5799..5993
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_572_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6698..7183
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003728ADC
anti-sigma regulatory factor, serine/threonine protein kinase
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ABF41318.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
13_1_40cm_4_scaffold_572_9
unknown

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7211..7459
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_572_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7479..8828)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026M8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83041.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_572_11
unknown

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comp(8860..9507)
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_4_scaffold_572_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10160..10936
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003794906
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACO32220.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium
13_1_40cm_4_scaffold_572_13
unknown

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10933..11781
DNA (849bp) protein (283aa)

This feature has no annotations

13_1_40cm_4_scaffold_572_14
unknown

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comp(11778..11870)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_4_scaffold_572_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11886..12242
DNA (357bp) protein (119aa)
Porin, LamB type n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUI8_KORVE
porin, LamB type
Porin, LamB type {ECO:0000313|EMBL:ABF39462.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_40cm_4_scaffold_572_16
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12472..13539
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B30C7
fucose:H+ symporter (FHS) family sugar MFS transporter
Sugar MFS transporter, fucose:H+ symporter (FHS) family {ECO:0000313|EMBL:ACO32133.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Aci
13_1_40cm_4_scaffold_572_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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13554..14552
DNA (999bp) protein (333aa)
Glucokinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZU3_CALAS
glk; glucokinase
Glucokinase {ECO:0000313|EMBL:BAL98530.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 1
13_1_40cm_4_scaffold_572_18
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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14556..15215
DNA (660bp) protein (220aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_13_Planctomycetes_60_9_curated
Putative mutase id=4413018 bin=GWF2_Planctomycetes_50_10 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
phosphoglycerate mutase protein
13_1_40cm_4_scaffold_572_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15212..16315
DNA (1104bp) protein (368aa)
transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=234267 species="Bacteria; Acidobacte
Transaldolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UB5_SOLUE
13_1_40cm_4_scaffold_572_20
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16379..18037
DNA (1659bp) protein (553aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
glucose-6-phosphate isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366B263
glucose-6-phosphate isomerase
13_1_40cm_4_scaffold_572_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18034..18966
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000381266F
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_40cm_4_scaffold_572_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19078..20109
DNA (1032bp) protein (344aa)
6-phosphogluconate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003827202
6-phosphogluconate dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
6-phosphogluconate dehydrogenase
13_1_40cm_4_scaffold_572_23
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20124..21527
DNA (1404bp) protein (468aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose 6-phosphate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035E2C39
13_1_40cm_4_scaffold_572_24

Not on your lists

21581..22297
DNA (717bp) protein (239aa)
6-phosphogluconolactonase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7W7_ANADF
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49095.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
6-phosphogluconolactonase
13_1_40cm_4_scaffold_572_25

Not on your lists

22367..22852
DNA (486bp) protein (162aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAW5_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49094.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RpiB/LacA/LacB family sugar-phosphate isomerase
13_1_40cm_4_scaffold_572_26

Not on your lists

22967..25054
DNA (2088bp) protein (696aa)
transketolase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003761A23
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49093.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transketolase
13_1_40cm_4_scaffold_572_27
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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25128..27068
DNA (1941bp) protein (647aa)
phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeoca
Phosphoketolase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XF87_9CHRO
Displaying 27 items

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