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13_1_40cm_4_scaffold_562

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_562_1
CG_PER_02, Peregrinibacteria, Bacteria

Not on your lists

2..805
DNA (804bp) protein (268aa)
DNA Polymerase X family (EC:2.7.7.7); K02347 DNA polymerase (family X) Tax=CG_PER_02
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3E173
DNA polymerase IV
13_1_40cm_4_scaffold_562_2
Ulva fasciata, Ulva, Ulvales, Ulvophyceae, Chlorophyta, Viridiplantae

Not on your lists

821..1531
DNA (711bp) protein (237aa)
ATP-dependent Clp protease regulatory subunit ClpC n=1 Tax=Ulva fasciata RepID=E6Y2A6_9CHLO
ATP-dependent Clp protease regulatory subunit ClpC {ECO:0000313|EMBL:ABR23161.1}; TaxID=111617 species="Eukaryota; Viridiplantae; Chlorophyta; Ulvophyceae; Ulvales; Ulvaceae; Ulva.;" source="Ulva fasc
clpC; ATP-dependent Clp protease ATP-binding subunit
13_1_40cm_4_scaffold_562_3
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

1563..2471
DNA (909bp) protein (303aa)
Putative oxidoreductase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYB7_THERP
putative oxidoreductase
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_4_scaffold_562_4
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2481..3629
DNA (1149bp) protein (383aa)
acyl-CoA dehydrogenase Tax=RBG_13_Deltaproteobacteria_65_10_curated
Acyl-CoA dehydrogenase domain protein id=4696833 bin=GWC2_Methylomirabilis_70_16 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
13_1_40cm_4_scaffold_562_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

3686..4144
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C609_SPHTD
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACZ39561.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaero
13_1_40cm_4_scaffold_562_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4141..5718
DNA (1578bp) protein (526aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYE3_RUBXD
EmrB/QacA family drug resistance transporter
Drug resistance transporter EmrB/QacA subfamily {ECO:0000313|EMBL:ABG03585.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubr
13_1_40cm_4_scaffold_562_7
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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5730..6566
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003811F00
glycosyl transferase family 2
Glycosyl transferase family protein {ECO:0000313|EMBL:EFO79234.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" so
13_1_40cm_4_scaffold_562_8
unknown

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6576..7220
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7250..8380
DNA (1131bp) protein (377aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Butyryl-CoA dehydrogenase id=4464474 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_562_10
unknown

Not on your lists

comp(8394..9590)
DNA (1197bp) protein (399aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_11
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9620..12010)
DNA (2391bp) protein (797aa)
ABC transporter related protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBA4_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFO81589.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source
ABC transporter-like protein
13_1_40cm_4_scaffold_562_12
unknown

Not on your lists

comp(12291..12524)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12575..13150)
DNA (576bp) protein (192aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacte
Thymidylate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB1_RHOMR
13_1_40cm_4_scaffold_562_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(13151..14731)
DNA (1581bp) protein (527aa)
single-stranded nucleic acid binding R3H domain-containing protein id=14633013 bin=bin9_gal15 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
single-stranded nucleic acid binding R3H domain-containing protein Tax=CSP1_3_Armatimonadetes
single-stranded nucleic acid binding R3H
13_1_40cm_4_scaffold_562_15
unknown

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comp(14728..15696)
DNA (969bp) protein (323aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_16
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15693..16244)
DNA (552bp) protein (184aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WPH0_9ACTO
glutamine amidotransferase subunit PdxT
13_1_40cm_4_scaffold_562_17
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16291..17217)
DNA (927bp) protein (309aa)
pdxS; pyridoxal biosynthesis lyase PdxS (EC:4.-.-.-) Tax=RBG_13_Chloroflexi_54_9_curated
atm:ANT_01650 pdxS; pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=1244770 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pyridoxal biosynthesis lyase PdxS
13_1_40cm_4_scaffold_562_18
unknown

Not on your lists

comp(17341..17901)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_19
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(17925..18692)
DNA (768bp) protein (256aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDW1_9FIRM
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_13_Chloroflexi_68_17_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_562_20
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18689..19825)
DNA (1137bp) protein (379aa)
Glycerate kinase {ECO:0000313|EMBL:EAX46519.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EAX46519.1};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;"
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTZ8_9FIRM
13_1_40cm_4_scaffold_562_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19844..20809)
DNA (966bp) protein (322aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Branched-chain amino acid aminotransferase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B865_HERA2
branched-chain amino acid aminotransferase
13_1_40cm_4_scaffold_562_22
unknown

Not on your lists

20941..21246
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_23
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21239..21730
DNA (492bp) protein (164aa)
UPF0234 protein SynRCC307_1657 n=1 Tax=Synechococcus sp. (strain RCC307) RepID=A5GUK1_SYNR3
UPF0234 protein yajQ
UPF0234 protein Glo7428_2801 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
13_1_40cm_4_scaffold_562_24
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21765..22466
DNA (702bp) protein (234aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMI4_CLOSH
13_1_40cm_4_scaffold_562_25
unknown

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22463..22870
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_26
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(23078..23830)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXZ7_9BACT
Short-chain alcohol dehydrogenase of unknown specificity
Uncharacterized protein {ECO:0000313|EMBL:CCW35188.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
13_1_40cm_4_scaffold_562_27
unknown

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23903..24352
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24460..24981)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLM2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90294.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_4_scaffold_562_29
unknown

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comp(24981..25463)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_4_scaffold_562_30
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

25590..26717
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJS4_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67931.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
hypothetical protein
Displaying items 1-30 of 35 in total

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