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13_1_40cm_4_scaffold_5626

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5626_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..881)
DNA (879bp) protein (293aa)
adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=GWA2_Rokubacteria_73_35_curated
Adenylosuccinate synthetase id=3779771 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenylosuccinate synthase
13_1_40cm_4_scaffold_5626_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(874..1845)
DNA (972bp) protein (324aa)
ATP phosphoribosyltransferase regulatory subunit id=3779772 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hisZ; ATP phosphoribosyltransferase regulatory subunit Tax=GWA2_Rokubacteria_73_35_curated
hisZ; ATP phosphoribosyltransferase regulatory subunit
13_1_40cm_4_scaffold_5626_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2144..2767)
DNA (624bp) protein (208aa)
Phosphoglycerate mutase id=3779774 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoglycerate mutase Tax=GWA2_Rokubacteria_73_35_curated
phosphoglycerate mutase
13_1_40cm_4_scaffold_5626_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2811..3953)
DNA (1143bp) protein (381aa)
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
Serine-glyoxylate aminotransferase id=3779775 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5626_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3964..5475)
DNA (1512bp) protein (504aa)
SagB-type dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4599711 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_5626_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5484..6503)
DNA (1020bp) protein (340aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase id=3779777 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5626_7
unknown

Not on your lists

comp(6510..6866)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_4_scaffold_5626_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6905..7177)
DNA (273bp) protein (91aa)
UPF0235 protein Cwoe_5214 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEC8_CONWI
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_5626_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7164..7643)
DNA (480bp) protein (160aa)
hypothetical protein; K04074 cell division initiation protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DivIVA family protein id=3884504 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell-division initiation protein
13_1_40cm_4_scaffold_5626_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7660..7965)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ABM7_THEID
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_5626_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7980..8777)
DNA (798bp) protein (266aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] id=14625495 bin=bin7_NC10_sister species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
13_1_40cm_4_scaffold_5626_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8774..9454)
DNA (681bp) protein (227aa)
hypothetical protein; K06997 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K06997 id=14625496 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alanine racemase domain-containing protein
13_1_40cm_4_scaffold_5626_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9485..9736)
DNA (252bp) protein (84aa)
hypothetical protein; K05810 conserved hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4191401 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-copper polyphenol oxidoreductase, laccase
13_1_40cm_4_scaffold_5626_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9691..10227)
DNA (537bp) protein (179aa)
Putative uncharacterized protein id=4191401 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K05810 conserved hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
laccase
13_1_40cm_4_scaffold_5626_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10449..11609)
DNA (1161bp) protein (387aa)
Cell division protein FtsZ id=4191402 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsZ; cell division protein ftsZ Tax=GWA2_Rokubacteria_73_35_curated
ftsZ; cell division protein ftsZ
13_1_40cm_4_scaffold_5626_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11677..12714)
DNA (1038bp) protein (346aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cell division protein ftsA id=4191403 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsA; cell division protein FtsA
13_1_40cm_4_scaffold_5626_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12869..13738)
DNA (870bp) protein (290aa)
polypeptide-transport-associated domain-containing protein; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Polypeptide-transport-associated domain protein FtsQ-type id=4191404 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_5626_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13731..14609)
DNA (879bp) protein (293aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=4191405 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5626_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(14603..16003)
DNA (1401bp) protein (467aa)
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=14625504 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
murC; UDP-N-acetylmuramate--L-alanine ligase
13_1_40cm_4_scaffold_5626_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15996..17069)
DNA (1074bp) protein (358aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
stage V sporulation protein E; K03588 cell division protein FtsW id=14625505 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
stage V sporulation protein E
13_1_40cm_4_scaffold_5626_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17322..18701)
DNA (1380bp) protein (460aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=4599628 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
13_1_40cm_4_scaffold_5626_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18748..19803)
DNA (1056bp) protein (352aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=GWA2_Rokubacteria_73_35_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=3503978 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
13_1_40cm_4_scaffold_5626_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19813..21207)
DNA (1395bp) protein (465aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=GWA2_Rokubacteria_73_35_curated
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=3503981 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5626_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21210..22316)
DNA (1107bp) protein (369aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_02_FULL_Rok
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase id=3503986 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5626_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22848..24833)
DNA (1986bp) protein (662aa)
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWA2_Rokubacteria_73_35_curated
Peptidoglycan synthetase FtsI id=4599619 bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI
13_1_40cm_4_scaffold_5626_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24830..25237)
DNA (408bp) protein (136aa)
hypothetical protein id=3504170 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_5626_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25234..26070)
DNA (837bp) protein (279aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ribosomal RNA small subunit methyltransferase H id=3504171 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mraW; S-adenosyl-methyltransferase MraW
13_1_40cm_4_scaffold_5626_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26109..26594)
DNA (486bp) protein (162aa)
cell division protein MraZ; K03925 MraZ protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protein MraZ id=3504172 bin=GWA2_Methylomirabilis_73_35 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MraZ protein
13_1_40cm_4_scaffold_5626_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26747..27517)
DNA (771bp) protein (257aa)
peptidase M48, Ste24p Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M48, Ste24p id=3884424 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M48, Ste24p
13_1_40cm_4_scaffold_5626_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27539..28048)
DNA (510bp) protein (170aa)
hypothetical protein id=4775186 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Displaying items 1-30 of 40 in total

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