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13_1_40cm_4_scaffold_5694

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5694_1
unknown

Not on your lists

3..404
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_4_scaffold_5694_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

637..1515
DNA (879bp) protein (293aa)
id=14628103 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_5694_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1928..2284
DNA (357bp) protein (119aa)
Putative uncharacterized protein id=5022308 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_5694_4
unknown

Not on your lists

comp(2426..2668)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_5694_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2793..3341)
DNA (549bp) protein (183aa)
id=2556866 Tax=GWA2_Rokubacteria_70_23_curated
id=3639818 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5694_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3376..3702)
DNA (327bp) protein (109aa)
id=3938572 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3938572 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_5694_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3702..3989)
DNA (288bp) protein (96aa)
Heat shock protein Hsp20 id=2913038 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
heat shock protein Hsp20 Tax=GWC2_Rokubacteria_70_16_curated
heat shock protein, hsp20 family
13_1_40cm_4_scaffold_5694_8
unknown

Not on your lists

4143..4493
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_5694_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4483..4995
DNA (513bp) protein (171aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=1746153 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_5694_10

Not on your lists

5020..5367
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN20131.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=3485457 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
13_1_40cm_4_scaffold_5694_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5364..5915
DNA (552bp) protein (184aa)
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] Tax=RBG_16_Acidobacteria_70_10_curated
Phosphohistidine phosphatase, SixA n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NK12_ROSCS
phosphohistidine phosphatase SixA
13_1_40cm_4_scaffold_5694_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6166..6456
DNA (291bp) protein (97aa)
RNP-1 like RNA-binding protein id=4283016 bin=GWC2_Methylomirabilis_70_16 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RNP-1 like RNA-binding protein Tax=GWC2_Rokubacteria_70_16_curated
RNP-1 like RNA-binding protein
13_1_40cm_4_scaffold_5694_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6528..6737)
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3696597 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrosopumilus salaria genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_5694_14
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6766..7116)
DNA (351bp) protein (117aa)
hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Putative uncharacterized protein id=3365197 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_5694_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7479..7904)
DNA (426bp) protein (142aa)
id=4695004 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4695004 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_5694_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7901..8650)
DNA (750bp) protein (250aa)
fatty acid desaturase Tax=GWA2_Rokubacteria_70_23_curated
Putative fatty acid desaturase id=4918777 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_APKG10H12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fatty acid desaturase
13_1_40cm_4_scaffold_5694_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8700..9017)
DNA (318bp) protein (106aa)
id=3938572 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14627830 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_5694_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9524..9868
DNA (345bp) protein (115aa)
Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_5694_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9926..10291)
DNA (366bp) protein (122aa)
hypothetical protein id=2653040 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_5694_20
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(10357..10938)
DNA (582bp) protein (194aa)
id=14626054 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
id=14626054 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_5694_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11164..11478
DNA (315bp) protein (105aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
RNP-1 like RNA-binding protein id=1884756 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNP-1 like RNA-binding protein
13_1_40cm_4_scaffold_5694_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11765..12223)
DNA (459bp) protein (153aa)
60 kDa chaperonin id=5002885 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) Tax=GWA2_Rokubacteria_73_35_curated
groEL; molecular chaperone GroEL
13_1_40cm_4_scaffold_5694_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12220..12765)
DNA (546bp) protein (182aa)
60 kDa chaperonin id=4564651 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) Tax=GWA2_Rokubacteria_73_35_curated
chaperonin GroL
Displaying 23 items

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