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13_1_40cm_4_scaffold_598

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_598_1
unknown

Not on your lists

comp(200..1048)
DNA (849bp) protein (283aa)

This feature has no annotations

13_1_40cm_4_scaffold_598_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1154..1699
DNA (546bp) protein (182aa)
Putative reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMS4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETX01819.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_598_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1703..2086
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D750_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL12499.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
13_1_40cm_4_scaffold_598_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2810..3250
DNA (441bp) protein (147aa)
acyl-CoA transferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003718416
Acyl-CoA transferase {ECO:0000313|EMBL:ETR78045.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_1_40cm_4_scaffold_598_5
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3306..4181)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00036B33BF
PQQ-dependent dehydrogenase {ECO:0000313|EMBL:EGK71006.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversa
alcohol dehydrogenase
13_1_40cm_4_scaffold_598_6
unknown

Not on your lists

4222..5031
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_40cm_4_scaffold_598_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5047..5634)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6G5_9BRAD
2Fe-2S ferredoxin {ECO:0000313|EMBL:KJC58411.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP
rieske iron-sulfur protein
13_1_40cm_4_scaffold_598_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

5772..6287
DNA (516bp) protein (172aa)
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_4_scaffold_598_9
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..7392)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ENZ1_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ37885.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
13_1_40cm_4_scaffold_598_10
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7534..9078)
DNA (1545bp) protein (515aa)
O-succinylbenzoate--CoA ligase n=1 Tax=Frankia sp. CN3 RepID=G6H6K1_9ACTO
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADP83292.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_40cm_4_scaffold_598_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9104..10228)
DNA (1125bp) protein (375aa)
adenylate/guanylate cyclase Tax=CSP1_5_NC10
adenylate/guanylate cyclase id=14429036 bin=bin3_NC10 species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase
13_1_40cm_4_scaffold_598_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10237..10668)
DNA (432bp) protein (144aa)
desulfoferrodoxin ferrous iron-binding region; K05919 superoxide reductase [EC:1.15.1.2] id=14627204 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
sor; rubredoxin superoxide reductase (1-Fe-SOR) (EC:1.15.1.2); K05919 superoxide reductase [EC:1.15.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
desulfoferrodoxin ferrous iron-binding region
13_1_40cm_4_scaffold_598_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10692..11066)
DNA (375bp) protein (125aa)
response regulator in two-component regulatory system (CheY-like protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator in two-component regulatory system (CheY-like protein) id=14627203 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
response regulator in two-component regulatory system (CheY-like protein)
13_1_40cm_4_scaffold_598_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11063..12679)
DNA (1617bp) protein (539aa)
histidine kinase (EC:2.7.13.3) id=14627202 bin=bin7_NC10_sister species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
histidine kinase (EC:2.7.13.3) Tax=CSP1_6_Rokubacteria
histidine kinase (EC:2.7.13.3)
13_1_40cm_4_scaffold_598_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12698..13108)
DNA (411bp) protein (137aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627205 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_598_16
unknown

Not on your lists

13561..13896
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_598_17
unknown

Not on your lists

13884..14009
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_4_scaffold_598_18
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14055..15035
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2Q976_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EMD23246.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;
hypothetical protein
13_1_40cm_4_scaffold_598_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15224..16630)
DNA (1407bp) protein (469aa)
UbiD family decarboxylase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R3V7_SPISS
UbiD family decarboxylase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
UbiD family decarboxylase
13_1_40cm_4_scaffold_598_20
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16783..17007
DNA (225bp) protein (75aa)
4-hydroxyphenylacetate 3-hydroxylase; K00483 4-hydroxyphenylacetate-3-monooxygenase large chain [EC:1.14.14.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK69_PSEUX
4-hydroxyphenylacetate 3-hydroxylase
13_1_40cm_4_scaffold_598_21
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16977..17237
DNA (261bp) protein (87aa)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8R8_STRRD
Pyoverdin chromophore biosynthetic protein pvcC {ECO:0000313|EMBL:KGT75331.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sourc
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
13_1_40cm_4_scaffold_598_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17234..18511
DNA (1278bp) protein (426aa)
Extracellular ligand-binding receptor id=3987077 bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livJ; putative branched-chain amino acid ABC transporter binding component; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
livJ; branched-chain amino acid ABC transporter substrate binding protein
13_1_40cm_4_scaffold_598_23
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

18592..19464
DNA (873bp) protein (291aa)
livM; putative branched-chain amino acid ABC transporter permease component; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Putative branched-chain amino acid ABC transporter permease component id=3109912 bin=GWF2_Methylomirabilis_70_14 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livM; branched-chain amino acid ABC transporter permease
13_1_40cm_4_scaffold_598_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19468..20400
DNA (933bp) protein (311aa)
Branched-chain amino acid transport system permease protein LivM id=4166560 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livH; putative branched chain amino acid ABC transporter permease component; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
livH; branched chain amino acid ABC transporter permease
13_1_40cm_4_scaffold_598_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20409..21134
DNA (726bp) protein (242aa)
Putative branched-chain amino acid ABC transporter ATP-binding component id=3987071 bin=GWC2_Methylomirabilis_70_24 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livG; putative branched-chain amino acid ABC transporter ATP-binding component; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
livG; branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_598_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21124..21855
DNA (732bp) protein (244aa)
livF; putative high-affinity branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport ATP-binding protein LivF id=4166558 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
13_1_40cm_4_scaffold_598_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22158..23045
DNA (888bp) protein (296aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomona
Methylisocitrate lyase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIT2_9PROT
methylisocitrate lyase
13_1_40cm_4_scaffold_598_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23223..24335
DNA (1113bp) protein (371aa)
GAF/GGDEF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Diguanylate cyclase with GAF sensor id=4699803 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF/GGDEF domain-containing protein
13_1_40cm_4_scaffold_598_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

24332..24760
DNA (429bp) protein (143aa)
PAS modulated Fis family sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cetoacetate metabolism regulatory protein atoC id=2772883 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Acetoacetate metabolism regulatory protein AtoC
13_1_40cm_4_scaffold_598_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24842..26482
DNA (1641bp) protein (547aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hydantoinase B/oxoprolinase (EC:3.5.2.9)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI00037556EE
Displaying items 1-30 of 36 in total

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