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13_1_40cm_4_scaffold_603

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_603_1
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..509
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034A3B6F
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
13_1_40cm_4_scaffold_603_2
unknown

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comp(982..1152)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_603_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1183..1803
DNA (621bp) protein (207aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD49_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF62395.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicr
two component, sigma54 specific, Fis family transcriptional regulator
13_1_40cm_4_scaffold_603_4
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(1875..3626)
DNA (1752bp) protein (584aa)
cell surface receptor IPT/TIG domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_1_40cm_4_scaffold_603_5
unknown

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3727..4719
DNA (993bp) protein (331aa)

This feature has no annotations

13_1_40cm_4_scaffold_603_6
unknown

Not on your lists

comp(4634..5050)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_4_scaffold_603_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5387..5680)
DNA (294bp) protein (98aa)
thiol-disulfide isomerase-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
redoxin id=4740803 bin=GWC2_Methylomirabilis_70_16 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
resA; thiol-disulfide oxidoreductase ResA
13_1_40cm_4_scaffold_603_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5913..6365)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K98_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07636.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
13_1_40cm_4_scaffold_603_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6382..8064)
DNA (1683bp) protein (561aa)
h16_A3563; 5'-nucleotidase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
h16_A3563; 5'-nucleotidase id=14627057 bin=bin7_NC10_sister species=unknown genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
h16_A3563; 5'-nucleotidase
13_1_40cm_4_scaffold_603_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8068..9378)
DNA (1311bp) protein (437aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627058 bin=bin7_NC10_sister species=Halorhodospira halophila genus=Halorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_603_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9389..9721)
DNA (333bp) protein (111aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Sulfur compound chelating protein SoxZ id=4841180 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sulfur oxidation protein SoxZ
13_1_40cm_4_scaffold_603_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9723..10259)
DNA (537bp) protein (179aa)
sulfur oxidation protein SoxY Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4841179 bin=GWA2_Methylomirabilis_73_35 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative sulfur oxidation protein (soxY)
13_1_40cm_4_scaffold_603_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10348..11718
DNA (1371bp) protein (457aa)
hypothetical protein id=14627058 bin=bin7_NC10_sister species=Halorhodospira halophila genus=Halorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_603_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

11723..12712
DNA (990bp) protein (330aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14627983 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_603_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12732..15545)
DNA (2814bp) protein (938aa)
Formate dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B4_THERP
formate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
formate dehydrogenase
13_1_40cm_4_scaffold_603_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15545..17131)
DNA (1587bp) protein (529aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B5_THERP
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4Fe-4S ferredoxin
13_1_40cm_4_scaffold_603_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17136..17939)
DNA (804bp) protein (268aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3662434 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_603_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17983..18567)
DNA (585bp) protein (195aa)
cytochrome c class I Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cytochrome c id=3662435 bin=GWA2_Methylomirabilis_73_35 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c, class I
13_1_40cm_4_scaffold_603_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18590..19846)
DNA (1257bp) protein (419aa)
soxF; sulfide dehydrogenase (flavocytochrome), flavoprotein subunit id=14625587 bin=bin7_NC10_sister species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
soxF; sulfide dehydrogenase (flavocytochrome), flavoprotein subunit Tax=CSP1_6_Rokubacteria
soxF; flavocytochrome c sulfide dehydrogenase protein
13_1_40cm_4_scaffold_603_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20018..21187)
DNA (1170bp) protein (390aa)
hypothetical protein; K07112 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3662437 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_603_21
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(21195..22103)
DNA (909bp) protein (303aa)
Metallo-beta-lactamase family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4X0_THERP
metallo-beta-lactamase family protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27
13_1_40cm_4_scaffold_603_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22571..24655)
DNA (2085bp) protein (695aa)
translation elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation elongation factor G
13_1_40cm_4_scaffold_603_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24719..25954)
DNA (1236bp) protein (412aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=GWA2_Rokubacteria_73_35_curated
thrC; threonine synthase (EC:4.2.3.1)
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 23 items

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