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13_1_40cm_4_scaffold_612

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_612_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..638
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YB39_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42094.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_612_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

635..1765
DNA (1131bp) protein (377aa)
Glycosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q7R6_9DELT
putative glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
glycosyltransferase
13_1_40cm_4_scaffold_612_3
RLO_PLX_64_10, Bacteria

Not on your lists

1770..2939
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003054721
13_1_40cm_4_scaffold_612_4
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2939..4135
DNA (1197bp) protein (399aa)
Glycosyl transferase group 1 n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPR2_DESBD
group 1 glycosyl transferase
Tax=BJP_08E140C01_Desulfomicrobium_58_14
13_1_40cm_4_scaffold_612_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4206..6020
DNA (1815bp) protein (605aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Asparagine synthetase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYU5_9PLAN
asparagine synthase
13_1_40cm_4_scaffold_612_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

6011..7144
DNA (1134bp) protein (378aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Glycosyl transferase family 2 id=4474572 bin=GWC2_OP3-like_45_7 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
family 2 glycosyl transferase
13_1_40cm_4_scaffold_612_7
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7141..7911
DNA (771bp) protein (257aa)
polysaccharide deacetylase n=1 Tax=Schlesneria paludicola RepID=UPI00029ACE47
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADY59735.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera br
13_1_40cm_4_scaffold_612_8
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7883..8230
DNA (348bp) protein (116aa)
Polysaccharide deacetylase family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CE24_9PLAN
NODE_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97469.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
polysaccharide deacetylase
13_1_40cm_4_scaffold_612_9
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8227..9102
DNA (876bp) protein (292aa)
Uncharacterized protein (Fragment) n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6K0W8_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST25046.1}; Flags: Fragment;; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rose
methyltransferase family protein
13_1_40cm_4_scaffold_612_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9106..10263
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZV2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20266.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_40cm_4_scaffold_612_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10297..11805
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036D08DF
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
polysaccharide biosynthesis protein
13_1_40cm_4_scaffold_612_12
unknown

Not on your lists

11802..12983
DNA (1182bp) protein (394aa)

This feature has no annotations

13_1_40cm_4_scaffold_612_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12986..13891
DNA (906bp) protein (302aa)
transmembrane protein EpsH id=12557480 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Eight transmembrane protein EpsH {ECO:0000313|EMBL:CDI02414.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus
eight transmembrane protein EpsH
13_1_40cm_4_scaffold_612_14

Not on your lists

13994..14491
DNA (498bp) protein (166aa)
Eight transmembrane protein EpsH n=1 Tax=uncultured bacterium 92 RepID=E3T6B7_9BACT
Eight transmembrane protein EpsH {ECO:0000313|EMBL:ADC35861.1}; TaxID=698394 species="Bacteria; environmental samples.;" source="uncultured bacterium 92.;"
hypothetical protein
13_1_40cm_4_scaffold_612_15
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14488..16527
DNA (2040bp) protein (680aa)
GAF domain-containing sensor histidine kinase Tax=CG_Delta_03
Putative uncharacterized protein id=2213256 bin=GWB2_Proteobacteria_55_19 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
sensor histidine kinase, GAF domain-containing
13_1_40cm_4_scaffold_612_16
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16514..17899
DNA (1386bp) protein (462aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Marichromatium purpuratum 984 RepID=F9TVZ2_MARPU
Fis family transcriptional regulator {ECO:0000313|EMBL:KIE42017.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
Fis family transcriptional regulator
13_1_40cm_4_scaffold_612_17
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18158..18868
DNA (711bp) protein (237aa)
Putative uncharacterized protein Tax=GWA2_Deltaproteobacteria_54_12_curated
13_1_40cm_4_scaffold_612_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18976..22179
DNA (3204bp) protein (1068aa)
Probable TPR-domain containing protein id=3262811 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TPR-domain containing protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_612_19
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(22183..25707)
DNA (3525bp) protein (1175aa)
Repeat-containing protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74BT1_GEOSL
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
repeat-containing protein
13_1_40cm_4_scaffold_612_20
unknown

Not on your lists

26034..26243
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_612_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26325..27746
DNA (1422bp) protein (474aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) id=14625267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
13_1_40cm_4_scaffold_612_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

27751..28674
DNA (924bp) protein (308aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ribonuclease PH id=4871521 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ribonuclease PH
13_1_40cm_4_scaffold_612_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


28626..29174
DNA (549bp) protein (183aa)
non-canonical purine NTP pyrophosphatase (EC:3.1.4.1) Tax=GWA2_Rokubacteria_73_35_curated
non-canonical purine NTP pyrophosphatase (EC:3.1.4.1)
Non-canonical purine NTP pyrophosphatase id=4994650 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_612_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29218..30462
DNA (1245bp) protein (415aa)
amidohydrolase; K07045 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Amidohydrolase family protein id=2157264 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
BarH
13_1_40cm_4_scaffold_612_25
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30511..31146)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000287C103
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGG34539.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
13_1_40cm_4_scaffold_612_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

31278..32879
DNA (1602bp) protein (534aa)
TPR repeat-containing protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein id=14623050 bin=bin5_DeltaP species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
TPR repeat-containing protein
13_1_40cm_4_scaffold_612_27
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32893..33579)
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX05897.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative hydroxyacid oxidoreductase
13_1_40cm_4_scaffold_612_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(33534..33764)
DNA (231bp) protein (77aa)
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3261978 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces acidiscabies genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_612_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33776..34663)
DNA (888bp) protein (296aa)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2PSX3_9RHIZ
ABC transporter permease protein {ECO:0000313|EMBL:KFC63460.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative amino acid ABC transporter LivHM family permease protein
13_1_40cm_4_scaffold_612_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34674..35534)
DNA (861bp) protein (287aa)
Hydrophobic amino acid ABC transporter permease n=1 Tax=Nitratireductor indicus C115 RepID=K2N9J1_9RHIZ
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KFC63461.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hydrophobic amino acid ABC transporter permease
Displaying items 1-30 of 31 in total

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