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13_1_40cm_4_scaffold_591

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_591_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=GWC2_Rokubacteria_70_16_curated
tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase id=4547685 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_591_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(390..1577)
DNA (1188bp) protein (396aa)
Extracellular ligand-binding receptor id=4547691 bin=GWF2_Methylomirabilis_70_14 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
Extracellular ligand-binding receptor
13_1_40cm_4_scaffold_591_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1772..3142
DNA (1371bp) protein (457aa)
UbiD family decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
13_1_40cm_4_scaffold_591_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3139..3807
DNA (669bp) protein (223aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627784 bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_591_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3804..4424)
DNA (621bp) protein (207aa)
ilvG; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWC2_Rokubacteria_70_16_curated
Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit id=3164071 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_591_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4379..5392)
DNA (1014bp) protein (338aa)
ilvG; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWA2_Rokubacteria_70_23_curated
Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit id=3294249 bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_591_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5471..5842
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037C0B6F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_4_scaffold_591_8
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5847..7493)
DNA (1647bp) protein (549aa)
AMP-binding enzyme family protein {ECO:0000313|EMBL:EGK12727.1}; EC=6.2.1.- {ECO:0000313|EMBL:EGK12727.1};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Des
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-binding enzyme family protein n=1 Tax=Desmospora sp. 8437 RepID=F5SDZ0_9BACL
13_1_40cm_4_scaffold_591_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7490..8746)
DNA (1257bp) protein (419aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
protein binding protein id=14626651 bin=bin7_NC10_sister species=Dasypus novemcinctus genus=Dasypus taxon_order=Cingulata taxon_class=Mammalia phylum=Chordata tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_591_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9214..10206)
DNA (993bp) protein (331aa)
Putative uncharacterized protein id=2338962 bin=GWA2_Methylomirabilis_73_35 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted dehydrogenases and related proteins Tax=GWA2_Rokubacteria_73_35_curated
glucose-fructose oxidoreductase-like protein
13_1_40cm_4_scaffold_591_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10423..12636
DNA (2214bp) protein (738aa)
PAS/PAC sensor hybrid histidine kinase id=4942499 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS/PAC sensor hybrid histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_591_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12643..13029)
DNA (387bp) protein (129aa)
Putative Histidine kinase id=4726950 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor signal transduction histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
Signal transduction histidine kinase
13_1_40cm_4_scaffold_591_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13140..14294
DNA (1155bp) protein (385aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWC2_Rokubacteria_70_16_curated
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase id=4813972 bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_591_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14287..14667
DNA (381bp) protein (127aa)
hypothetical protein; K07068 Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3677765 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_591_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14827..16053
DNA (1227bp) protein (409aa)
Putative O-linked N-acetylglucosamine transferase, SPINDLY family id=1325892 bin=GWE1_T_denit_62_9 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative O-linked N-acetylglucosamine transferase, SPINDLY family Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
13_1_40cm_4_scaffold_591_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16050..17405
DNA (1356bp) protein (452aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TPR repeat protein id=4029902 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_591_17
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17573..18034
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YYH3_PHOPR
Uncharacterized protein {ECO:0000313|EMBL:EAS41349.1}; TaxID=314280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundu
13_1_40cm_4_scaffold_591_18
unknown

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18031..18150
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_4_scaffold_591_19
unknown

Not on your lists

18179..18457
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_591_20
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18454..19869)
DNA (1416bp) protein (472aa)
Glycogen debranching enzyme, putative n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GLL6_9DELT
Glycogen debranching enzyme, putative {ECO:0000313|EMBL:EKO37855.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" sou
glycogen debranching protein
13_1_40cm_4_scaffold_591_21
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19836..20243)
DNA (408bp) protein (136aa)
malQ4; 4-alpha-glucanotransferase (EC:2.4.1.25) Tax=GWC2_Nitrospirae_57_9_curated
Glycogen debranching enzyme n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UE25_ANASK
glycogen debranching protein
13_1_40cm_4_scaffold_591_22
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20416..22332)
DNA (1917bp) protein (639aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Desulfovibrio sp. U5L RepID=I2PYG6_9DELT
1,4-alpha-glucan branching protein
13_1_40cm_4_scaffold_591_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22376..24640)
DNA (2265bp) protein (755aa)
carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_591_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24806..26131)
DNA (1326bp) protein (442aa)
Phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=GWA2_Rokubacteria_73_35_curated
Phenylacetate--CoA ligase id=4585789 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
paaK; phenylacetate-CoA ligase
13_1_40cm_4_scaffold_591_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

26193..27437
DNA (1245bp) protein (415aa)
ubiD_R; UbiD-like subunit of putative (de) carboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UbiD2: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=2065167 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of putative (de) carboxylase
Displaying 25 items

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