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13_1_40cm_4_scaffold_619

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_619_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(393..800)
DNA (408bp) protein (136aa)
Putative translation initiation factor 5A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQ92_9ARCH
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
eif5A; translation elongation factor IF5A
13_1_40cm_4_scaffold_619_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(903..1526)
DNA (624bp) protein (208aa)
hypothetical protein id=14428466 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_619_trna_1
unknown

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1690..1809
DNA (120bp)
transferRNA
13_1_40cm_4_scaffold_619_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1854..2357
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQK5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI04849.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
AsnC/Lrp family transcriptional regulator
13_1_40cm_4_scaffold_619_4

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comp(2350..3096)
DNA (747bp) protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL06347.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver and ANTAR domain-containing protein id=14426993 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Response regulator receiver and ANTAR domain-containing protein
13_1_40cm_4_scaffold_619_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3279..3938
DNA (660bp) protein (220aa)
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A id=14426995 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=CSP1_1_Thaumarchaeota
Chromosome segregation and condensation protein ScpA
13_1_40cm_4_scaffold_619_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4007..4582
DNA (576bp) protein (192aa)
chromosome segregation and condensation protein ScpB id=14426996 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
chromosome segregation and condensation protein ScpB Tax=CSP1_1_Thaumarchaeota
Chromosome segregation and condensation protein ScpB
13_1_40cm_4_scaffold_619_7

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4665..5045
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL85094.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribosomal protein S8E
ribosomal protein S8E; K02995 small subunit ribosomal protein S8e id=14426997 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_619_8
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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5050..5349
DNA (300bp) protein (100aa)
SRP19 protein
SRP19 protein {ECO:0000313|EMBL:AJA93035.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
signal recognition particle subunit SRP19; K03105 signal recognition particle subunit SRP19 id=14426998 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_619_9
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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5423..5692
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BA14_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW71347.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_4_scaffold_619_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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5689..6648
DNA (960bp) protein (320aa)
Zinc finger TFIIB-type domain-containing protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KHX8_9ARCH
Zinc finger TFIIB-type domain-containing protein {ECO:0000313|EMBL:EGG43019.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source
Zinc finger TFIIB-type domain protein
13_1_40cm_4_scaffold_619_11
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(7059..7268)
DNA (210bp) protein (70aa)
TPR repeat-containing protein n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4FXQ2_METM5
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABO34986.1}; Flags: Precursor;; TaxID=402880 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="
13_1_40cm_4_scaffold_619_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7360..7710)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEG2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83728.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_4_scaffold_619_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(7816..8187)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVT1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06703.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_619_14
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8369..9154
DNA (786bp) protein (262aa)
FeS assembly ATPase SufC n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB63_9ARCH
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AFS82327.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2
13_1_40cm_4_scaffold_619_trna_2
unknown

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9511..9610
DNA (100bp)
transferRNA
13_1_40cm_4_scaffold_619_15
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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10281..10610
DNA (330bp) protein (110aa)
Metal dependent phosphohydrolase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4S8_9ARCH
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AFS80419.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus
13_1_40cm_4_scaffold_619_16

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comp(10857..11168)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00036D860C
Uncharacterized protein {ECO:0000313|EMBL:AIF14871.1}; TaxID=1456242 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_68_B04.;"
hypothetical protein
13_1_40cm_4_scaffold_619_17

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comp(11172..12149)
DNA (978bp) protein (326aa)
hemB; Delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KHW8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM09450.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_619_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12185..13387)
DNA (1203bp) protein (401aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
glutamyl-tRNA reductase id=14427008 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
glutamyl-tRNA reductase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_619_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13435..14055)
DNA (621bp) protein (207aa)
siroheme synthase/precorrin-2 oxidase (EC:1.3.1.76 4.99.1.4); K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=CSP1_1_Thaumarchaeota
siroheme synthase/precorrin-2 oxidase (EC:1.3.1.76 4.99.1.4); K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] id=14427007 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
siroheme synthase/precorrin-2 oxidase (EC:1.3.1.76 4.99.1.4)
13_1_40cm_4_scaffold_619_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14174..15193
DNA (1020bp) protein (340aa)
AsnC family transcriptional regulator id=14427006 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
AsnC family transcriptional regulator Tax=CSP1_1_Thaumarchaeota
winged helix-turn-helix DNA-binding protein
13_1_40cm_4_scaffold_619_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15203..15631)
DNA (429bp) protein (143aa)
aldo/keto reductase Tax=CSP1_1_Thaumarchaeota
aldo/keto reductase id=14427005 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Oxidoreductase, aldo/keto reductase family protein
13_1_40cm_4_scaffold_619_22

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comp(16173..16718)
DNA (546bp) protein (182aa)
DUF1802 domain-containing protein {ECO:0000313|EMBL:AIE97882.1}; TaxID=1455960 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_03_D08.;"
hypothetical protein id=14427004 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PF08819 domain protein
13_1_40cm_4_scaffold_619_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16715..17386)
DNA (672bp) protein (224aa)
chlorite dismutase id=14427003 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
chlorite dismutase Tax=CSP1_1_Thaumarchaeota
chlorite O(2)-lyase
13_1_40cm_4_scaffold_619_24
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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17585..17902
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KI54_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG42962.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_4_scaffold_619_25

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18210..18578
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0Z8L2_9ZZZZ
Marine sediment metagenome DNA, contig: S12H4_S06165 {ECO:0000313|EMBL:GAI92989.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_4_scaffold_619_26
unknown

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18732..19172
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_4_scaffold_619_27
unknown

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comp(19635..19799)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 29 items

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