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13_1_40cm_4_scaffold_62

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_62_1
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1..705)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036D08DF
polysaccharide biosynthesis protein Tax=RBG_16_Zixibacteria_40_9_curated
O-antigen and teichoic acid-like export protein
13_1_40cm_4_scaffold_62_2
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(695..1528)
DNA (834bp) protein (278aa)
Polysaccharide deacetylase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WTF6_9ALTE
Polysaccharide deacetylase {ECO:0000313|EMBL:ENO14307.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter n
polysaccharide deacetylase
13_1_40cm_4_scaffold_62_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1525..4698)
DNA (3174bp) protein (1058aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PH26_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42563.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_62_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4695..6755)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIL2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43099.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_62_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6814..7872)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=A1VI10_DESVV
Uncharacterized protein {ECO:0000313|EMBL:ETX01910.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
FemAB-related protein, PEP-CTERM system-associated
13_1_40cm_4_scaffold_62_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7883..8776)
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01846.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Polysaccharide deacetylase id=3453944 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polysaccharide deactylase family protein
13_1_40cm_4_scaffold_62_7
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(8840..9991)
DNA (1152bp) protein (384aa)
glycosyl transferase group 2 protein (EC:2.4.1.-) Tax=RBG_16_RIF03_38_10_curated
glycosyl transferase group 2 protein (EC:2.4.1.-)
Glycosyl transferase, group 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PH30_9BACT
13_1_40cm_4_scaffold_62_8
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(9988..11172)
DNA (1185bp) protein (395aa)
putative aminotransferase (EC:2.6.1.-) Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WT00_GEOS8
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_40cm_4_scaffold_62_9
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(11169..11585)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00035C1982
Pyridoxal-dependent decarboxylase
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
13_1_40cm_4_scaffold_62_10
unknown

Not on your lists

comp(11597..12724)
DNA (1128bp) protein (376aa)

This feature has no annotations

13_1_40cm_4_scaffold_62_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12733..13731)
DNA (999bp) protein (333aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Bll6280 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GR5_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ66740.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
13_1_40cm_4_scaffold_62_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13751..15034)
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrylase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GR4_BRADU
O-acetylhomoserine sulfhydrylase {ECO:0000313|EMBL:BAR54334.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
cysD; O-acetylhomoserine sulfhydrylase
13_1_40cm_4_scaffold_62_13
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15031..15297)
DNA (267bp) protein (89aa)
Putative 3-oxoacyl-(Acyl-carrier-protein) reductase (3-ketoacyl-acyl carrier protein reductase) {ECO:0000313|EMBL:CCD86076.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCD86076.1};; TaxID=115808 species="Bacter
Putative 3-oxoacyl-(Acyl-carrier-protein) reductase (3-ketoacyl-acyl carrier protein reductase) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RVU9_9BRAD
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_62_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15290..16690)
DNA (1401bp) protein (467aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1F5_RHOP2
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABD05705.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
13_1_40cm_4_scaffold_62_15
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16677..16922)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Methylobacterium RepID=B0UC30_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA20781.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
13_1_40cm_4_scaffold_62_16
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(16980..17648)
DNA (669bp) protein (223aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
13_1_40cm_4_scaffold_62_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17728..18933)
DNA (1206bp) protein (402aa)
putative undecaprenyl-phosphate galactose phosphotransferase RfbP (fragment) (EC:2.7.8.6) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Bacterial sugar transferase domain protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T1A8Q9_9ZZZZ
hypothetical protein
13_1_40cm_4_scaffold_62_18
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18917..19933)
DNA (1017bp) protein (339aa)
Putative gluconeogenesis factor n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN89_DESK7
hypothetical protein
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum k
13_1_40cm_4_scaffold_62_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19930..20853)
DNA (924bp) protein (308aa)
Capsular exopolysaccharide family protein n=1 Tax=Enterococcus faecium EnGen0030 RepID=L2QNS0_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ETX01844.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Tyrosine-protein kinase EpsD
13_1_40cm_4_scaffold_62_20
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(20850..21836)
DNA (987bp) protein (329aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6C8_LEPCP
Peptidoglycan-binding lysin domain-containing protein; K02450 general secretion pathway protein A Tax=RBG_16_Acidobacteria_68_9_curated
peptidoglycan-binding domain-containing protein
13_1_40cm_4_scaffold_62_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(21894..23417)
DNA (1524bp) protein (508aa)
Polysaccharide chain length determinant protein n=2 Tax=Geobacter metallireducens RepID=Q39VP4_GEOMG
chain length determinant protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide chain length determinant protein
13_1_40cm_4_scaffold_62_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(23420..24049)
DNA (630bp) protein (210aa)
Capsule polysaccharide export protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QZN8_9DELT
periplasmic protein involved in polysaccharide export Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide biosynthesis/export protein
13_1_40cm_4_scaffold_62_23
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(24068..24640)
DNA (573bp) protein (191aa)
Transcription antitermination protein NusG (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BE69_9ZZZZ
NusG antitermination factor Tax=RBG_13_Nitrospirae_41_22_curated
transcription antitermination protein
13_1_40cm_4_scaffold_62_24
unknown

Not on your lists

comp(24755..25054)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_62_25
unknown

Not on your lists

comp(25051..25341)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_62_26
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(25338..26045)
DNA (708bp) protein (236aa)
response regulator receiver/ANTAR domain-containing protein id=14429095 bin=bin3_NC10 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
response regulator receiver/ANTAR domain-containing protein Tax=CSP1_5_NC10
response regulator receiver
13_1_40cm_4_scaffold_62_27
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(26176..26808)
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator Tax=CSP1_5_NC10
LuxR family transcriptional regulator
13_1_40cm_4_scaffold_62_28
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(26909..27211)
DNA (303bp) protein (101aa)
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator Tax=CSP1_5_NC10
response regulator
Displaying 28 items

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