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13_1_40cm_4_scaffold_6357

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6357_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..211)
DNA (210bp) protein (70aa)
gamma-glutamyltransferase 2 (EC:2.3.2.2)
Gamma-glutamyltransferase id=2558577 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ggt; gamma-glutamyltranspeptidase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_6357_2
unknown

Not on your lists

comp(557..724)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_6357_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1128..1415
DNA (288bp) protein (96aa)
Thymidylate synthase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VN19_9CYAN
coenzyme PQQ biosynthesis protein PqqD Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_6357_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1412..1894
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH36_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_6357_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1891..3801
DNA (1911bp) protein (637aa)
UPI0003CFBECB related cluster n=1 Tax=unknown RepID=UPI0003CFBECB
asparagine synthase (glutamine-hydrolyzing) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
asparagine synthase
13_1_40cm_4_scaffold_6357_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3798..3953
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_6357_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

3991..5151
DNA (1161bp) protein (387aa)
putative RNA methylase (EC:2.1.1.-); K11434 protein arginine N-methyltransferase 1 [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
putative RNA methylase (EC:2.1.1.-)
UPI0003D0685D related cluster n=1 Tax=unknown RepID=UPI0003D0685D
13_1_40cm_4_scaffold_6357_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5158..6105
DNA (948bp) protein (316aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
UPI0003CFB0DF related cluster n=1 Tax=unknown RepID=UPI0003CFB0DF
13_1_40cm_4_scaffold_6357_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6102..7241
DNA (1140bp) protein (380aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_6357_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7252..7773
DNA (522bp) protein (174aa)
hypothetical protein; K06962 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3986310 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_6357_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7806..8054
DNA (249bp) protein (83aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3986308 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6357_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8197..8679
DNA (483bp) protein (161aa)
nuclease; K01174 micrococcal nuclease [EC:3.1.31.1] Tax=GWA2_Rokubacteria_73_35_curated
Thermonuclease id=3986306 bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
micrococcal nuclease-like protein
13_1_40cm_4_scaffold_6357_13
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8708..9124)
DNA (417bp) protein (139aa)
Acetyltransferase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTW0_9ACTO
Acetyltransferase {ECO:0000313|EMBL:EGD43478.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
acetyltransferase
13_1_40cm_4_scaffold_6357_14
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9372..9911)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Burkholderia cenocepacia KC-01 RepID=V4ZTP1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESS38488.1}; TaxID=1396830 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia comple
13_1_40cm_4_scaffold_6357_15
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9927..11498)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Burkholderia cenocepacia KC-01 RepID=V4ZTP1_9BURK
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
13_1_40cm_4_scaffold_6357_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12040..12621
DNA (582bp) protein (194aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase id=3986305 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6357_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12754..13020
DNA (267bp) protein (89aa)
Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_6357_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13031..13456)
DNA (426bp) protein (142aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Peptide chain release factor id=3665312 bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptide chain release factor
13_1_40cm_4_scaffold_6357_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13681..15384
DNA (1704bp) protein (568aa)
adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] Tax=GWA2_Rokubacteria_73_35_curated
adenine deaminase (EC:3.5.4.2)
Adenine deaminase id=3112746 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_6357_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15381..16313
DNA (933bp) protein (311aa)
polyhydroxyalkanoic acid depolymerase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Esterase, PHB depolymerase family id=3986302 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium populi genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polyhydroxyalkanoic acid depolymerase
13_1_40cm_4_scaffold_6357_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16310..17578
DNA (1269bp) protein (423aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00037BB937
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_6357_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17702..19315
DNA (1614bp) protein (538aa)
ABC transporter peptide-binding protein id=3884414 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
peptide ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_6357_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

19338..20291
DNA (954bp) protein (318aa)
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Peptide ABC transporter permease protein id=3884416 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
13_1_40cm_4_scaffold_6357_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

20281..21177
DNA (897bp) protein (299aa)
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Peptide ABC transporter permease protein id=4775215 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
13_1_40cm_4_scaffold_6357_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21364..22776
DNA (1413bp) protein (471aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidase id=3884420 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidase
13_1_40cm_4_scaffold_6357_26
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

22781..23014
DNA (234bp) protein (78aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=4775212 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6357_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(23104..24051)
DNA (948bp) protein (316aa)
id=14627806 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
Displaying 27 items

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