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13_1_40cm_4_scaffold_6559

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6559_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..133
DNA (132bp) protein (44aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_4_scaffold_6559_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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130..1098
DNA (969bp) protein (323aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KFH9_9FIRM
Homoserine kinase
13_1_40cm_4_scaffold_6559_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1095..1370
DNA (276bp) protein (92aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFA5_ANADE
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ABS27787.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source=
13_1_40cm_4_scaffold_6559_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1374..2522
DNA (1149bp) protein (383aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF4_ANASK
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACG74790.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_4_scaffold_6559_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2966..3613
DNA (648bp) protein (216aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_1_40cm_4_scaffold_6559_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3647..4504
DNA (858bp) protein (286aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_6559_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4532..4714
DNA (183bp) protein (61aa)
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
putative nucleotide-binding protein; K09767 hypothetical protein id=108878 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
13_1_40cm_4_scaffold_6559_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4711..5001
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003764CA7
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
13_1_40cm_4_scaffold_6559_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4998..6176
DNA (1179bp) protein (393aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT
Ribosomal protein S12 methylthiotransferase rimO
13_1_40cm_4_scaffold_6559_10
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6205..7767
DNA (1563bp) protein (521aa)
hemL; glutamate-1-semialdehyde aminomutase HemL (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde aminomutase HemL n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V821_9CHRO
13_1_40cm_4_scaffold_6559_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7743..8798
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain protein
13_1_40cm_4_scaffold_6559_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8839..9474
DNA (636bp) protein (212aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_6559_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9471..10478
DNA (1008bp) protein (336aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
oxidoreductase domain protein
13_1_40cm_4_scaffold_6559_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10490..11977
DNA (1488bp) protein (496aa)
lnt-1; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Apolipoprotein N-acyltransferase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGF7_GEOBB
lnt-1; apolipoprotein N-acyltransferase
13_1_40cm_4_scaffold_6559_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11974..14013
DNA (2040bp) protein (680aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hydantoinase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00035F868F
N-methylhydantoinase A/acetone carboxylase beta subunit
13_1_40cm_4_scaffold_6559_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14010..15554
DNA (1545bp) protein (515aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD9_RUBXD
N-methylhydantoinase B/acetone carboxylase alpha subunit
13_1_40cm_4_scaffold_6559_17
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15551..15907
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCD2_MEISD
TauE-like permease, putative Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
13_1_40cm_4_scaffold_6559_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(15994..17661)
DNA (1668bp) protein (556aa)
metal dependent phosphohydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
Metal dependent phosphohydrolase id=4372559 bin=GWA2_Planctomycetia_40_7 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein
13_1_40cm_4_scaffold_6559_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17873..18574)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_6559_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(18589..19455)
DNA (867bp) protein (289aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative phytochrome sensor protein
13_1_40cm_4_scaffold_6559_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(19542..20216)
DNA (675bp) protein (225aa)
Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L5_GEMAT
Crp family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
cyclic nucleotide-binding protein
13_1_40cm_4_scaffold_6559_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


20336..20557
DNA (222bp) protein (74aa)
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L31 id=3650204 bin=GWA2_Ignavibacteriae_54_16_partial species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
rpmE; 50S ribosomal protein L31
13_1_40cm_4_scaffold_6559_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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20562..21620
DNA (1059bp) protein (353aa)
Peptide chain release factor 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L6_GEMAT
Peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
13_1_40cm_4_scaffold_6559_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21613..22431
DNA (819bp) protein (273aa)
putative methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Release factor glutamine methyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1E4_9GAMM
protein-(glutamine-N5) methyltransferase, release factor-specific
13_1_40cm_4_scaffold_6559_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22431..22784
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF964
13_1_40cm_4_scaffold_6559_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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22795..23436
DNA (642bp) protein (214aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2B8_SPHTD
13_1_40cm_4_scaffold_6559_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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23436..23783
DNA (348bp) protein (116aa)
ctpA; carboxyl-terminal processing protease precursor (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carboxyl-terminal processing protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M0_GEMAT
carboxyl-terminal protease
Displaying 27 items

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