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13_1_40cm_4_scaffold_661

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_661_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3..539)
DNA (537bp) protein (179aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14426358 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
Polysulfide reductase NrfD
13_1_40cm_4_scaffold_661_2
CSP1_5_NC10, NC10, Bacteria

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comp(544..3528)
DNA (2985bp) protein (995aa)
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14429767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=CSP1_5_NC10
putative oxidoreductase
13_1_40cm_4_scaffold_661_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3539..4105)
DNA (567bp) protein (189aa)
cytochrome c3 Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c2 id=14426356 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
actA; menaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA
13_1_40cm_4_scaffold_661_4
unknown

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comp(4243..4713)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_4_scaffold_661_5
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(4720..5784)
DNA (1065bp) protein (355aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
13_1_40cm_4_scaffold_661_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5765..6922)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_661_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6934..8088)
DNA (1155bp) protein (385aa)
Sarcosine oxidase (EC:1.5.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_661_8
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8178..9047)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000380DAFC
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KFM95769.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus ma
dihydrodipicolinate synthetase
13_1_40cm_4_scaffold_661_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9056..9829)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_661_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9829..10629)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_661_11
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10863..11516
DNA (654bp) protein (218aa)
Sodium:phosphate symporter n=1 Tax=Sphingobium baderi LL03 RepID=T0GBD4_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
13_1_40cm_4_scaffold_661_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11513..12310)
DNA (798bp) protein (266aa)
multidrug ABC transporter; K09686 antibiotic transport system permease protein id=14429039 bin=bin3_NC10 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
multidrug ABC transporter; K09686 antibiotic transport system permease protein Tax=CSP1_5_NC10
multidrug ABC transporter
13_1_40cm_4_scaffold_661_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12313..13065)
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETW94418.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp
daunorubicin resistance ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein id=14429040 bin=bin3_NC10 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
daunorubicin resistance ABC transporter ATPase subunit
13_1_40cm_4_scaffold_661_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13062..14174)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YFB4_SORCE
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1254432 species="Bacteria; Proteobacteria;
13_1_40cm_4_scaffold_661_15
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14164..14436)
DNA (273bp) protein (91aa)
Coenzyme PQQ synthesis protein D n=1 Tax=Thauera sp. 27 RepID=N6XY75_9RHOO
Coenzyme PQQ synthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; Pyrroloquinoline quinone biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; TaxID=305700 species="Bacteria; Proteobacteria; B
hypothetical protein
13_1_40cm_4_scaffold_661_16
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14436..15149)
DNA (714bp) protein (238aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinolin
coenzyme PQQ biosynthesis protein C (EC:1.3.3.11)
Pyrroloquinoline-quinone synthase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U2E5_9CYAN
13_1_40cm_4_scaffold_661_17
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(15146..16051)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000365EF04
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=1245923 species="Bacteria; Cyanobacteria; N
pyrroloquinoline quinone biosynthesis protein PqqB
13_1_40cm_4_scaffold_661_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(16345..17724)
DNA (1380bp) protein (460aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML24_9BACT
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator {ECO:0000313|EMBL:CBE69866.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candi
13_1_40cm_4_scaffold_661_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(17721..19205)
DNA (1485bp) protein (495aa)
Histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBE69867.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylo
Putative Histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML25_9BACT
13_1_40cm_4_scaffold_661_20
unknown

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comp(19215..19556)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_661_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20330..21076)
DNA (747bp) protein (249aa)
putative methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
13_1_40cm_4_scaffold_661_22
unknown

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comp(21073..21360)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_661_23
unknown

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comp(21920..22681)
DNA (762bp) protein (254aa)

This feature has no annotations

13_1_40cm_4_scaffold_661_24

Not on your lists

comp(23829..24260)
DNA (432bp) protein (144aa)
Predicted kinase related to galactokinase and mevalonate kinase (EC:2.7.1.168)
Predicted kinase related to galactokinase and mevalonate kinase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EST8_9BACT
Marine sediment metagenome DNA, contig: S01H1_S08009 {ECO:0000313|EMBL:GAG03971.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Displaying 24 items

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